H. sapiens Gene: SLC18A3 - ENSG00000187714 - Homo sapiens (human)

General information

Ensembl IDENSG00000187714
NameSLC18A3
Descriptionsolute carrier family 18 (vesicular acetylcholine transporter), member 3 [Source:HGNC Symbol;Acc:HGNC:10936]
OrganismHomo sapiens (human)
Synonym(s)b2r7s1, vacht

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002196adenohypophysis
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.37e4
  • 1.37e4
  • 2.10e4
  • 2.60e4
  • 2.61e4
74.78850
  • 74.78850
  • 61.14005
  • 51.96860
  • 51.81612
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.53e4
  • 1.56e4
  • 1.97e4
  • 2.29e4
  • 3.20e4
73.54671
  • 73.54671
  • 71.77286
  • 71.14352
  • 63.58830
  • 57.65738
  • 40.83078
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0007220late embryonic stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000068embryo stage
  • UBERON:0000111organogenesis stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.72e4
  • 1.84e4
  • 1.87e4
  • 3.15e4
  • 3.16e4
72.64912
  • 72.64912
  • 68.23619
  • 65.93790
  • 65.51945
  • 41.76409
  • 41.65132
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.61e4
  • 1.61e4
  • 1.96e4
  • 1.99e4
  • 2.02e4
  • 2.09e4
  • 2.20e4
70.33692
  • 70.33692
  • 63.75736
  • 63.17309
  • 62.73403
  • 61.39209
  • 59.28839
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 1.94e4
  • 2.01e4
  • 2.12e4
  • 2.14e4
  • 2.89e4
67.26130
  • 67.26130
  • 64.20813
  • 62.88308
  • 60.80250
  • 60.46297
  • 46.68141
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:00000842-5 year-old child stage (human)
  • UBERON:0034920infant stage
  • HsapDv:00000856-12 year-old child stage (human)
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
  • 1.79e4
  • 1.84e4
  • 1.90e4
  • 2.01e4
  • 2.07e4
  • 2.25e4
  • 2.32e4
  • 2.41e4
  • 3.19e4
67.17182
  • 67.17182
  • 66.95669
  • 66.06857
  • 64.87680
  • 62.92696
  • 61.77551
  • 58.49668
  • 57.09044
  • 55.57523
  • 41.06671
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000093human aged stage
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
  • 1.91e4
  • 1.95e4
  • 2.43e4
  • 2.72e4
  • 2.73e4
  • 2.79e4
67.16610
  • 67.16610
  • 64.75808
  • 64.06828
  • 55.08798
  • 49.70261
  • 49.60035
  • 48.53570
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.82e4
  • 1.82e4
  • 2.40e4
  • 3.17e4
66.39329
  • 66.39329
  • 55.75082
  • 41.39880
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001160fundus of stomach
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.83e4
  • 1.83e4
  • 2.45e4
  • 3.03e4
  • 3.26e4
66.21781
  • 66.21781
  • 54.83579
  • 44.09627
  • 39.82933
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • HsapDv:0000200sixth LMP month human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.93e4
  • 1.93e4
  • 2.13e4
  • 2.71e4
  • 3.18e4
  • 3.18e4
64.40709
  • 64.40709
  • 60.71460
  • 49.98975
  • 41.34403
  • 41.28038
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
2.01e4
  • 2.01e4
  • 2.21e4
  • 2.25e4
  • 2.58e4
  • 2.60e4
  • 2.77e4
  • 2.92e4
62.96007
  • 62.96007
  • 59.14609
  • 58.35452
  • 52.29988
  • 52.01120
  • 48.87223
  • 46.08736
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.17e4
  • 2.17e4
  • 2.35e4
  • 2.66e4
59.90107
  • 59.90107
  • 56.56088
  • 50.82992
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002477medial globus pallidus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.22e4
  • 2.22e4
  • 2.56e4
59.03098
  • 59.03098
  • 52.72254
AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.38e4
  • 2.38e4
  • 2.59e4
  • 2.65e4
  • 2.77e4
  • 2.96e4
56.05741
  • 56.05741
  • 52.15817
  • 51.06330
  • 48.87066
  • 45.26488
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.46e4
  • 2.46e4
  • 2.50e4
  • 2.52e4
  • 2.64e4
  • 2.78e4
54.49342
  • 54.49342
  • 53.73411
  • 53.47946
  • 51.30407
  • 48.65688
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.51e4
  • 2.51e4
  • 2.58e4
  • 2.66e4
  • 2.76e4
  • 2.78e4
53.71855
  • 53.71855
  • 52.37111
  • 50.94991
  • 48.95462
  • 48.66785
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.54e4
  • 2.54e4
  • 2.63e4
  • 2.86e4
  • 2.87e4
  • 3.20e4
53.09814
  • 53.09814
  • 51.39582
  • 47.20994
  • 46.91961
  • 40.90838
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.57e4
  • 2.57e4
  • 3.92e4
  • 4.27e4
52.51097
  • 52.51097
  • 27.60323
  • 21.05715
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.63e4
  • 2.63e4
  • 2.93e4
  • 3.29e4
  • 3.59e4
51.44747
  • 51.44747
  • 45.83641
  • 39.22658
  • 33.71063
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
2.71e4
  • 2.71e4
  • 4.09e4
49.86823
  • 49.86823
  • 24.47493
AEIR
  • AEIR
  • AEIR
UBERON:0003027cingulate cortex
  • HsapDv:0000087human adult stage (human)
2.72e4
  • 2.72e4
49.68726
  • 49.68726
AEIR
  • AEIR
UBERON:0001264pancreas
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.72e4
  • 2.72e4
  • 2.99e4
49.67709
  • 49.67709
  • 44.68673
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.76e4
  • 2.76e4
  • 2.98e4
  • 3.63e4
  • 3.87e4
  • 4.20e4
49.02216
  • 49.02216
  • 44.93439
  • 32.96610
  • 28.51239
  • 22.43912
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013473lower esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.77e4
  • 2.77e4
  • 4.51e4
48.92866
  • 48.92866
  • 16.75995
AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.80e4
  • 2.80e4
  • 2.93e4
  • 3.07e4
  • 3.47e4
  • 3.72e4
48.26780
  • 48.26780
  • 45.86413
  • 43.38725
  • 35.82040
  • 31.37617
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.89e4
  • 2.89e4
  • 2.97e4
  • 3.06e4
  • 4.76e4
46.54570
  • 46.54570
  • 45.09923
  • 43.55358
  • 12.13713
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.94e4
  • 2.94e4
  • 4.06e4
  • 4.26e4
45.66541
  • 45.66541
  • 24.98508
  • 21.32853
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.95e4
  • 2.95e4
  • 3.30e4
  • 3.71e4
  • 4.05e4
45.49657
  • 45.49657
  • 39.01485
  • 31.40279
  • 25.22014
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.97e4
  • 2.97e4
  • 3.18e4
  • 3.20e4
45.21244
  • 45.21244
  • 41.25890
  • 40.98113
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0007220late embryonic stage
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
3.03e4
  • 3.03e4
  • 3.10e4
  • 3.14e4
  • 3.15e4
  • 3.19e4
  • 3.91e4
  • 4.47e4
44.02739
  • 44.02739
  • 42.79214
  • 41.94919
  • 41.72589
  • 41.00004
  • 27.69945
  • 17.34286
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002367prostate gland
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.03e4
  • 3.03e4
  • 3.17e4
  • 4.03e4
  • 4.21e4
  • 4.30e4
  • 4.40e4
43.95062
  • 43.95062
  • 41.38572
  • 25.53842
  • 22.25243
  • 20.56481
  • 18.64184
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:0000092human middle aged stage (human)
3.19e4
  • 3.19e4
41.16013
  • 41.16013
AEIR
  • AEIR
UBERON:0001891midbrain
  • HsapDv:0000092human middle aged stage (human)
3.20e4
  • 3.20e4
40.92728
  • 40.92728
AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000087human adult stage (human)
3.26e4
  • 3.26e4
39.74526
  • 39.74526
AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.30e4
  • 3.30e4
  • 3.66e4
  • 3.80e4
  • 4.00e4
38.98995
  • 38.98995
  • 32.42519
  • 29.79050
  • 26.19319
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.67e4
  • 3.67e4
  • 3.69e4
  • 3.83e4
  • 3.89e4
  • 4.07e4
32.21442
  • 32.21442
  • 31.91472
  • 29.32410
  • 28.20366
  • 24.85247
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035825left adrenal gland cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.69e4
  • 3.69e4
  • 4.22e4
31.78390
  • 31.78390
  • 22.04239
AEIR
  • AEIR
  • AEIR
UBERON:0001234left adrenal gland
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.87e4
  • 3.87e4
  • 3.98e4
  • 4.34e4
28.48075
  • 28.48075
  • 26.55327
  • 19.92589
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.01e4
  • 4.01e4
  • 4.47e4
25.84061
  • 25.84061
  • 17.47399
AEIR
  • AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.11e4
  • 4.11e4
  • 4.19e4
  • 4.56e4
24.13839
  • 24.13839
  • 22.54705
  • 15.83036
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
4.22e4
  • 4.22e4
  • 4.27e4
  • 4.34e4
22.05274
  • 22.05274
  • 21.21172
  • 19.91036
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS7231 (CCDS7231.1)
EMBLAC073366, AK313094, BC007765, CH471187, U09210, U10554
EnsemblENSG00000187714 (SLC18A3)
HGNCHGNC:10936 (SLC18A3)
Uniprot/SWISSPROTQ16572, VACHT_HUMAN

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