H. sapiens Gene: CLEC2A - ENSG00000188393 - Homo sapiens (human)

General information

Ensembl IDENSG00000188393
NameCLEC2A
DescriptionC-type lectin domain family 2 member A [Source:HGNC Symbol;Acc:HGNC:24191]
OrganismHomo sapiens (human)
Synonym(s)a5y4g5, a9qks2, a9qks3, inpe5792, kacl, pilar, unq5792

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000113post-juvenile adult stage
1.97e3
  • 1.97e3
96.42723
  • 96.42723
AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
3.71e3
  • 3.71e3
  • 5.71e3
  • 5.79e3
  • 5.88e3
  • 5.97e3
  • 6.83e3
93.26062
  • 93.26062
  • 89.62653
  • 89.49477
  • 89.33065
  • 89.15637
  • 87.58997
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.09e3
  • 4.09e3
  • 5.89e3
  • 6.13e3
  • 6.75e3
  • 8.36e3
  • 1.12e4
92.56916
  • 92.56916
  • 89.29659
  • 88.86486
  • 87.73401
  • 84.82122
  • 79.73134
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
1.59e4
  • 1.59e4
  • 3.05e4
  • 3.25e4
  • 3.85e4
71.10167
  • 71.10167
  • 44.52457
  • 41.05503
  • 30.09084
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
67.50754
  • 67.50754
AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.95e4
  • 1.95e4
  • 3.07e4
  • 3.17e4
  • 3.41e4
  • 4.29e4
64.60081
  • 64.60081
  • 44.18181
  • 42.52116
  • 38.01611
  • 22.09106
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.98e4
  • 1.98e4
  • 2.67e4
  • 3.36e4
64.09139
  • 64.09139
  • 51.52555
  • 38.95322
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.09e4
  • 2.09e4
  • 2.44e4
  • 3.03e4
  • 3.04e4
  • 3.54e4
62.02063
  • 62.02063
  • 55.62330
  • 44.92363
  • 44.77084
  • 35.68479
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.11e4
  • 2.11e4
  • 3.01e4
  • 3.23e4
  • 3.28e4
61.75731
  • 61.75731
  • 45.35854
  • 41.28166
  • 40.48573
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012249ectocervix
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
2.21e4
  • 2.21e4
  • 2.22e4
  • 4.72e4
59.78897
  • 59.78897
  • 59.69816
  • 14.36101
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.37e4
  • 2.37e4
56.90040
  • 56.90040
AEIR
  • AEIR
UBERON:0002250popliteal artery
  • HsapDv:0000092human middle aged stage (human)
2.60e4
  • 2.60e4
52.78475
  • 52.78475
AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
2.65e4
  • 2.65e4
  • 4.30e4
51.85337
  • 51.85337
  • 21.88531
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034920infant stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.81e4
  • 2.81e4
  • 2.90e4
  • 3.17e4
  • 4.03e4
  • 4.16e4
48.96602
  • 48.96602
  • 47.24856
  • 42.35044
  • 26.78831
  • 24.45541
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.87e4
  • 2.87e4
  • 3.15e4
  • 3.33e4
  • 3.60e4
  • 3.65e4
  • 3.65e4
47.85137
  • 47.85137
  • 42.72876
  • 39.56843
  • 34.59952
  • 33.77600
  • 33.66414
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.95e4
  • 2.95e4
  • 2.97e4
  • 3.20e4
46.33524
  • 46.33524
  • 46.10768
  • 41.79501
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.96e4
  • 2.96e4
  • 3.02e4
46.19233
  • 46.19233
  • 45.14122
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.04e4
  • 3.04e4
  • 3.43e4
  • 3.71e4
44.75175
  • 44.75175
  • 37.74796
  • 32.67451
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.09e4
  • 3.09e4
  • 3.83e4
43.85838
  • 43.85838
  • 30.45934
AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.11e4
  • 3.11e4
  • 3.30e4
  • 3.33e4
43.44724
  • 43.44724
  • 40.07128
  • 39.59695
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.13e4
  • 3.13e4
  • 3.15e4
  • 3.75e4
43.12649
  • 43.12649
  • 42.78034
  • 31.81441
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.14e4
  • 3.14e4
  • 3.51e4
  • 3.71e4
  • 3.71e4
  • 3.72e4
42.98669
  • 42.98669
  • 36.28246
  • 32.64484
  • 32.54094
  • 32.41188
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
3.17e4
  • 3.17e4
  • 3.72e4
  • 3.87e4
  • 3.97e4
42.42162
  • 42.42162
  • 32.35961
  • 29.67391
  • 27.88762
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.18e4
  • 3.18e4
  • 3.41e4
  • 3.81e4
42.18092
  • 42.18092
  • 38.06324
  • 30.82974
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:0000092human middle aged stage (human)
3.23e4
  • 3.23e4
41.37752
  • 41.37752
AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.25e4
  • 3.25e4
  • 3.53e4
  • 3.98e4
40.98433
  • 40.98433
  • 35.95805
  • 27.77095
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.28e4
  • 3.28e4
  • 3.51e4
  • 3.58e4
  • 3.64e4
40.42305
  • 40.42305
  • 36.30217
  • 34.94147
  • 33.85760
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.29e4
  • 3.29e4
  • 3.56e4
  • 3.75e4
40.25094
  • 40.25094
  • 35.30951
  • 31.81626
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.33e4
  • 3.33e4
  • 3.50e4
  • 3.56e4
  • 3.70e4
  • 3.79e4
39.55396
  • 39.55396
  • 36.41522
  • 35.38876
  • 32.75055
  • 31.17642
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.37e4
  • 3.37e4
  • 3.53e4
  • 3.64e4
38.74912
  • 38.74912
  • 35.89779
  • 33.86562
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.41e4
  • 3.41e4
  • 3.44e4
  • 3.55e4
38.01402
  • 38.01402
  • 37.46633
  • 35.52089
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
3.52e4
  • 3.52e4
  • 3.92e4
  • 3.95e4
36.08027
  • 36.08027
  • 28.73675
  • 28.26572
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
3.66e4
  • 3.66e4
33.48611
  • 33.48611
AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.67e4
  • 3.67e4
  • 3.94e4
  • 4.12e4
33.42383
  • 33.42383
  • 28.38911
  • 25.21699
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.67e4
  • 3.67e4
33.38615
  • 33.38615
AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:0000087human adult stage (human)
3.85e4
  • 3.85e4
29.99982
  • 29.99982
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.93e4
  • 3.93e4
  • 4.02e4
  • 4.03e4
  • 4.07e4
28.63915
  • 28.63915
  • 26.93658
  • 26.84614
  • 26.14164
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.95e4
  • 3.95e4
  • 4.12e4
  • 4.16e4
28.29977
  • 28.29977
  • 25.22177
  • 24.51662
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.07e4
  • 4.07e4
  • 4.15e4
  • 4.23e4
26.10472
  • 26.10472
  • 24.55926
  • 23.26272
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • HsapDv:0000088human early adulthood stage (human)
4.07e4
  • 4.07e4
26.10236
  • 26.10236
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.10e4
  • 4.10e4
  • 4.12e4
25.53672
  • 25.53672
  • 25.18423
AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.14e4
  • 4.14e4
  • 4.26e4
  • 4.42e4
24.88498
  • 24.88498
  • 22.61678
  • 19.78397
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.14e4
  • 4.14e4
  • 4.15e4
  • 4.16e4
24.84476
  • 24.84476
  • 24.56258
  • 24.50398
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002119left ovary
  • HsapDv:0000087human adult stage (human)
4.29e4
  • 4.29e4
22.11409
  • 22.11409
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS44829 (CCDS44829.1), CCDS8606 (CCDS8606.1)
EMBLAY359126, EF127467, EU095393, EU095394
EnsemblENSG00000188393 (CLEC2A)
HGNCHGNC:24191 (CLEC2A)
OncoMXCLEC2A (CLEC2A)
Uniprot/SWISSPROTCLC2A_HUMAN, Q6UVW9

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