H. sapiens Gene: CACNA1C-AS4 - ENSG00000256025 - Homo sapiens (human)

General information

Ensembl IDENSG00000256025
NameCACNA1C-AS4
DescriptionCACNA1C antisense RNA 4 [Source:HGNC Symbol;Acc:HGNC:40116]
OrganismHomo sapiens (human)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.16e4
  • 1.16e4
  • 1.23e4
  • 1.36e4
  • 1.55e4
  • 1.76e4
78.59853
  • 78.59853
  • 77.35537
  • 74.82713
  • 71.44704
  • 67.54775
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034920infant stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
1.22e4
  • 1.22e4
  • 2.59e4
  • 2.65e4
  • 2.73e4
  • 2.75e4
  • 3.06e4
77.43175
  • 77.43175
  • 52.18761
  • 51.04167
  • 49.50512
  • 49.13964
  • 43.43432
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
1.25e4
  • 1.25e4
  • 2.01e4
76.91161
  • 76.91161
  • 62.78686
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.38e4
  • 1.38e4
  • 1.85e4
  • 1.96e4
74.59825
  • 74.59825
  • 65.81883
  • 63.86457
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.38e4
  • 1.38e4
  • 1.80e4
  • 1.86e4
74.48049
  • 74.48049
  • 66.78638
  • 65.73571
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • HsapDv:00000842-5 year-old child stage (human)
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:00000856-12 year-old child stage (human)
  • HsapDv:0000089young adult stage (human)
1.49e4
  • 1.49e4
  • 1.57e4
  • 1.63e4
  • 2.09e4
72.44265
  • 72.44265
  • 71.02143
  • 69.89176
  • 61.38941
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
1.54e4
  • 1.54e4
  • 1.54e4
  • 1.67e4
71.60364
  • 71.60364
  • 71.56526
  • 69.21695
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000197third LMP month human stage (human)
1.61e4
  • 1.61e4
70.32583
  • 70.32583
AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.96e4
  • 1.96e4
  • 2.14e4
  • 2.14e4
  • 2.39e4
  • 2.45e4
63.75485
  • 63.75485
  • 60.52693
  • 60.44492
  • 55.78145
  • 54.67694
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
1.98e4
  • 1.98e4
  • 2.02e4
  • 2.10e4
  • 2.22e4
  • 2.25e4
  • 2.26e4
63.36625
  • 63.36625
  • 62.71382
  • 61.19522
  • 58.90358
  • 58.46104
  • 58.26320
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.16e4
  • 2.16e4
  • 2.27e4
  • 2.88e4
60.06317
  • 60.06317
  • 57.99254
  • 46.72873
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002250popliteal artery
  • HsapDv:0000092human middle aged stage (human)
2.19e4
  • 2.19e4
59.52721
  • 59.52721
AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.20e4
  • 2.20e4
  • 2.41e4
  • 2.99e4
59.43884
  • 59.43884
  • 55.47399
  • 44.78156
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.32e4
  • 2.32e4
  • 2.51e4
  • 2.70e4
  • 2.73e4
  • 2.83e4
  • 3.12e4
57.08868
  • 57.08868
  • 53.59866
  • 50.21665
  • 49.50606
  • 47.75282
  • 42.46136
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001515thoracic aorta
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.54e4
  • 2.54e4
  • 3.27e4
53.02904
  • 53.02904
  • 39.58537
AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.56e4
  • 2.56e4
  • 3.21e4
  • 3.57e4
  • 3.66e4
52.75356
  • 52.75356
  • 40.65625
  • 34.11061
  • 32.42647
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
2.60e4
  • 2.60e4
  • 4.61e4
51.96897
  • 51.96897
  • 14.76497
AEIR
  • AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.64e4
  • 2.64e4
  • 2.68e4
  • 2.76e4
  • 2.98e4
51.20629
  • 51.20629
  • 50.57597
  • 48.96051
  • 45.01020
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.81e4
  • 2.81e4
  • 4.51e4
48.04389
  • 48.04389
  • 16.61954
AEIR
  • AEIR
  • AEIR
UBERON:0013473lower esophagus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.82e4
  • 2.82e4
  • 2.86e4
47.95523
  • 47.95523
  • 47.26440
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
2.87e4
  • 2.87e4
46.97440
  • 46.97440
AEIR
  • AEIR
UBERON:0009853body of uterus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.91e4
  • 2.91e4
  • 3.04e4
  • 3.55e4
46.23859
  • 46.23859
  • 43.84667
  • 34.40031
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.98e4
  • 2.98e4
  • 3.36e4
44.95630
  • 44.95630
  • 38.00488
AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.06e4
  • 3.06e4
  • 3.31e4
  • 3.48e4
43.54066
  • 43.54066
  • 38.83178
  • 35.68517
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.08e4
  • 3.08e4
  • 3.18e4
  • 3.23e4
  • 3.25e4
43.13560
  • 43.13560
  • 41.27535
  • 40.27958
  • 39.99821
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.08e4
  • 3.08e4
  • 3.20e4
  • 3.24e4
  • 3.34e4
  • 3.67e4
43.12679
  • 43.12679
  • 40.87957
  • 40.11955
  • 38.24779
  • 32.22162
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.13e4
  • 3.13e4
  • 3.52e4
42.21055
  • 42.21055
  • 34.91289
AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.18e4
  • 3.18e4
  • 3.41e4
  • 3.43e4
  • 3.59e4
  • 3.61e4
41.17372
  • 41.17372
  • 36.92342
  • 36.69779
  • 33.69018
  • 33.30666
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.24e4
  • 3.24e4
  • 3.30e4
  • 3.37e4
40.07039
  • 40.07039
  • 39.09725
  • 37.75784
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.28e4
  • 3.28e4
  • 3.53e4
39.49195
  • 39.49195
  • 34.84793
AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.31e4
  • 3.31e4
  • 3.47e4
  • 3.53e4
38.89994
  • 38.89994
  • 35.88882
  • 34.80978
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.34e4
  • 3.34e4
  • 3.46e4
  • 4.20e4
38.33538
  • 38.33538
  • 36.16449
  • 22.42648
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
3.38e4
  • 3.38e4
  • 3.62e4
  • 3.84e4
  • 3.87e4
37.53395
  • 37.53395
  • 33.16255
  • 29.00881
  • 28.53114
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.52e4
  • 3.52e4
  • 3.63e4
35.05246
  • 35.05246
  • 32.95928
AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.54e4
  • 3.54e4
  • 3.97e4
  • 4.46e4
34.58177
  • 34.58177
  • 26.64317
  • 17.70402
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002367prostate gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.55e4
  • 3.55e4
  • 3.80e4
34.49263
  • 34.49263
  • 29.83402
AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.61e4
  • 3.61e4
  • 3.77e4
  • 3.78e4
33.30045
  • 33.30045
  • 30.35334
  • 30.12021
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.70e4
  • 3.70e4
  • 3.77e4
  • 4.22e4
31.66264
  • 31.66264
  • 30.38472
  • 22.12245
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.72e4
  • 3.72e4
  • 3.72e4
  • 3.97e4
  • 4.30e4
31.32561
  • 31.32561
  • 31.31856
  • 26.66946
  • 20.49754
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.80e4
  • 3.80e4
  • 4.12e4
29.87377
  • 29.87377
  • 23.82334
AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.98e4
  • 3.98e4
  • 4.12e4
  • 4.38e4
26.55069
  • 26.55069
  • 23.82397
  • 19.06539
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.21e4
  • 4.21e4
  • 4.22e4
  • 4.43e4
22.17581
  • 22.17581
  • 21.99302
  • 18.10538
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.23e4
  • 4.23e4
  • 4.29e4
  • 4.33e4
21.91697
  • 21.91697
  • 20.71133
  • 20.02076
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002119left ovary
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.24e4
  • 4.24e4
  • 4.36e4
  • 4.39e4
21.59167
  • 21.59167
  • 19.49535
  • 18.90173
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.35e4
  • 4.35e4
  • 4.37e4
  • 4.63e4
19.71381
  • 19.71381
  • 19.30097
  • 14.43254
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.35e4
  • 4.35e4
  • 4.37e4
19.69631
  • 19.69631
  • 19.24606
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSG00000256025 (CACNA1C-AS4)
HGNCHGNC:40116 (CACNA1C-AS4)

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