H. sapiens Gene: LINC01475 - ENSG00000257582 - Homo sapiens (human)

General information

Ensembl IDENSG00000257582
NameLINC01475
Descriptionlong intergenic non-protein coding RNA 1475 [Source:HGNC Symbol;Acc:HGNC:51113]
OrganismHomo sapiens (human)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003454small intestine Peyer's patch
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
8.74e3
  • 8.74e3
  • 1.26e4
  • 1.33e4
  • 1.36e4
  • 1.37e4
  • 1.41e4
84.12
  • 84.12
  • 77.08
  • 75.93
  • 75.31
  • 75.13
  • 74.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
8.94e3
  • 8.94e3
  • 9.39e3
  • 1.05e4
  • 1.10e4
  • 1.28e4
83.77
  • 83.77
  • 82.94
  • 80.90
  • 80.08
  • 76.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
9.57e3
  • 9.57e3
  • 9.70e3
  • 1.01e4
  • 1.02e4
  • 1.05e4
  • 1.08e4
82.62
  • 82.62
  • 82.39
  • 81.74
  • 81.47
  • 80.99
  • 80.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
1.05e4
  • 1.05e4
  • 1.06e4
  • 1.06e4
  • 1.10e4
  • 1.16e4
  • 1.22e4
80.95
  • 80.95
  • 80.84
  • 80.72
  • 79.95
  • 78.88
  • 77.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
1.26e4
  • 1.26e4
  • 1.33e4
  • 1.36e4
  • 1.47e4
  • 1.48e4
77.05
  • 77.05
  • 75.80
  • 75.30
  • 73.35
  • 73.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.53e4
  • 1.53e4
  • 1.76e4
  • 2.44e4
  • 2.53e4
72.13
  • 72.13
  • 68.06
  • 55.74
  • 54.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000104life cycle
  • HsapDv:0000199fifth LMP month human stage (human)
1.63e4
  • 1.63e4
  • 2.40e4
70.46
  • 70.46
  • 56.39
AEIR
  • AEIR
  • AEIR
UBERON:0001052rectum
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0001160fundus of stomach
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.66e4
  • 1.66e4
  • 2.32e4
  • 3.26e4
  • 4.62e4
69.85
  • 69.85
  • 57.92
  • 40.84
  • 16.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.69e4
  • 1.69e4
  • 2.43e4
  • 2.56e4
  • 2.57e4
  • 2.71e4
  • 2.76e4
69.29
  • 69.29
  • 55.85
  • 53.59
  • 53.36
  • 50.82
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0004991mucosa of transverse colon
  • HsapDv:000009025-44 year-old human stage (human)
1.82e4
  • 1.82e4
66.96
  • 66.96
AEIR
  • AEIR
UBERON:0001154vermiform appendix
  • UBERON:0000113post-juvenile adult stage
1.83e4
  • 1.83e4
66.83
  • 66.83
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0000113post-juvenile adult stage
1.89e4
  • 1.89e4
65.59
  • 65.59
AEIR
  • AEIR
UBERON:0001043esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.15e4
  • 2.15e4
  • 2.39e4
  • 3.91e4
60.98
  • 60.98
  • 56.61
  • 29.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.16e4
  • 2.16e4
  • 2.38e4
  • 2.57e4
  • 2.79e4
  • 2.83e4
  • 2.94e4
60.80
  • 60.80
  • 56.72
  • 53.24
  • 49.35
  • 48.68
  • 46.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000113post-juvenile adult stage
2.24e4
  • 2.24e4
59.29
  • 59.29
AEIR
  • AEIR
UBERON:0002118right ovary
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.26e4
  • 2.26e4
  • 3.89e4
  • 4.30e4
58.99
  • 58.99
  • 29.36
  • 21.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001119right lobe of thyroid gland
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.33e4
  • 2.33e4
  • 3.19e4
  • 3.64e4
57.63
  • 57.63
  • 42.08
  • 33.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.38e4
  • 2.38e4
  • 2.46e4
  • 2.50e4
  • 2.51e4
  • 2.67e4
56.76
  • 56.76
  • 55.35
  • 54.59
  • 54.38
  • 51.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.39e4
  • 2.39e4
  • 4.30e4
56.51
  • 56.51
  • 21.89
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.41e4
  • 2.41e4
56.20
  • 56.20
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.69e4
  • 2.69e4
  • 2.76e4
  • 3.06e4
51.21
  • 51.21
  • 49.88
  • 44.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0007220late embryonic stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.72e4
  • 2.72e4
  • 3.19e4
  • 3.31e4
  • 4.50e4
  • 4.60e4
  • 4.71e4
50.60
  • 50.60
  • 42.08
  • 39.85
  • 18.28
  • 16.45
  • 14.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.80e4
  • 2.80e4
  • 3.15e4
  • 3.27e4
  • 3.42e4
  • 3.79e4
49.10
  • 49.10
  • 42.73
  • 40.61
  • 37.96
  • 31.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000576monocyte
  • UBERON:0000113post-juvenile adult stage
3.04e4
  • 3.04e4
44.82
  • 44.82
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
3.15e4
  • 3.15e4
  • 3.33e4
  • 3.65e4
  • 3.92e4
  • 4.28e4
  • 4.76e4
42.88
  • 42.88
  • 39.50
  • 33.76
  • 28.83
  • 22.22
  • 13.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000113post-juvenile adult stage
3.22e4
  • 3.22e4
41.56
  • 41.56
AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
3.31e4
  • 3.31e4
  • 3.33e4
  • 3.51e4
  • 3.58e4
  • 3.93e4
39.90
  • 39.90
  • 39.54
  • 36.21
  • 34.96
  • 28.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.40e4
  • 3.40e4
  • 4.56e4
  • 4.58e4
38.21
  • 38.21
  • 17.26
  • 16.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001120left lobe of thyroid gland
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.45e4
  • 3.45e4
  • 3.46e4
  • 3.67e4
37.27
  • 37.27
  • 37.13
  • 33.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.47e4
  • 3.47e4
  • 4.28e4
36.95
  • 36.95
  • 22.22
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.53e4
  • 3.53e4
  • 4.35e4
  • 4.50e4
  • 4.58e4
35.98
  • 35.98
  • 21.06
  • 18.30
  • 16.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.59e4
  • 3.59e4
  • 3.97e4
  • 4.03e4
  • 4.09e4
  • 4.12e4
  • 4.15e4
34.84
  • 34.84
  • 27.98
  • 26.83
  • 25.63
  • 25.19
  • 24.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.71e4
  • 3.71e4
  • 3.83e4
  • 3.97e4
  • 4.18e4
  • 4.20e4
32.66
  • 32.66
  • 30.37
  • 27.95
  • 24.14
  • 23.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.00e4
  • 4.00e4
  • 4.26e4
  • 4.55e4
27.31
  • 27.31
  • 22.64
  • 17.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.12e4
  • 4.12e4
  • 4.33e4
25.14
  • 25.14
  • 21.33
AEIR
  • AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.13e4
  • 4.13e4
  • 4.27e4
  • 4.57e4
25.05
  • 25.05
  • 22.50
  • 16.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.14e4
  • 4.14e4
  • 4.75e4
24.82
  • 24.82
  • 13.76
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
4.16e4
  • 4.16e4
  • 4.36e4
24.46
  • 24.46
  • 20.88
AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.38e4
  • 4.38e4
  • 4.41e4
20.48
  • 20.48
  • 19.84
AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.40e4
  • 4.40e4
  • 4.56e4
  • 4.58e4
20.01
  • 20.01
  • 17.16
  • 16.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.54e4
  • 4.54e4
  • 4.72e4
17.56
  • 17.56
  • 14.35
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSG00000257582 (LINC01475)
HGNCHGNC:51113 (LINC01475)
OncoMXLINC01475 (LINC01475)

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