H. sapiens Gene: LINC01500 - ENSG00000258583 - Homo sapiens (human)

General information

Ensembl IDENSG00000258583
NameLINC01500
Descriptionlong intergenic non-protein coding RNA 1500 [Source:HGNC Symbol;Acc:HGNC:51166]
OrganismHomo sapiens (human)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004534right testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
8.49e3
  • 8.49e3
  • 9.50e3
  • 9.52e3
  • 1.46e4
  • 1.81e4
84.32676
  • 84.32676
  • 82.44786
  • 82.41562
  • 73.08730
  • 66.57307
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
9.68e3
  • 9.68e3
  • 9.92e3
  • 1.06e4
  • 1.07e4
  • 1.07e4
  • 1.11e4
82.11449
  • 82.11449
  • 81.67502
  • 80.43886
  • 80.31675
  • 80.17840
  • 79.53831
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
9.73e3
  • 9.73e3
  • 1.20e4
  • 1.90e4
  • 2.34e4
  • 2.92e4
82.03665
  • 82.03665
  • 77.77347
  • 64.83601
  • 56.78897
  • 46.02263
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000019sperm
  • HsapDv:0000088human early adulthood stage (human)
1.07e4
  • 1.07e4
80.30936
  • 80.30936
AEIR
  • AEIR
UBERON:0002113kidney
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 3.14e4
67.31870
  • 67.31870
  • 42.03962
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • HsapDv:0000198fourth LMP month human stage (human)
2.18e4
  • 2.18e4
59.65311
  • 59.65311
AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.38e4
  • 2.38e4
  • 2.60e4
  • 2.65e4
  • 2.69e4
  • 2.77e4
56.10442
  • 56.10442
  • 51.88537
  • 51.12235
  • 50.23462
  • 48.74652
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0014892skeletal muscle organ
  • HsapDv:0000087human adult stage (human)
2.71e4
  • 2.71e4
49.95936
  • 49.95936
AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.80e4
  • 2.80e4
  • 2.90e4
  • 3.21e4
48.19061
  • 48.19061
  • 46.45264
  • 40.77498
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.81e4
  • 2.81e4
  • 3.18e4
48.18058
  • 48.18058
  • 41.32940
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
2.92e4
  • 2.92e4
  • 3.18e4
46.12838
  • 46.12838
  • 41.24618
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.00e4
  • 3.00e4
  • 4.07e4
  • 4.11e4
  • 4.25e4
44.62721
  • 44.62721
  • 24.90423
  • 24.12594
  • 21.52093
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.05e4
  • 3.05e4
  • 3.05e4
  • 3.45e4
  • 3.78e4
  • 4.04e4
  • 4.18e4
43.75024
  • 43.75024
  • 43.65396
  • 36.30331
  • 30.10634
  • 25.37570
  • 22.74354
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.05e4
  • 3.05e4
  • 3.68e4
  • 3.89e4
  • 4.02e4
43.67055
  • 43.67055
  • 31.97878
  • 28.17912
  • 25.71547
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.07e4
  • 3.07e4
  • 3.26e4
  • 3.90e4
43.35230
  • 43.35230
  • 39.70317
  • 27.90767
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005200thoracic mammary gland
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.07e4
  • 3.07e4
  • 3.18e4
  • 3.67e4
43.29554
  • 43.29554
  • 41.25851
  • 32.25139
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.12e4
  • 3.12e4
42.43025
  • 42.43025
AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000199fifth LMP month human stage (human)
3.12e4
  • 3.12e4
42.38858
  • 42.38858
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
3.12e4
  • 3.12e4
  • 3.12e4
  • 3.13e4
42.37240
  • 42.37240
  • 42.30190
  • 42.17679
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007808adipose tissue of abdominal region
  • HsapDv:0000092human middle aged stage (human)
3.13e4
  • 3.13e4
42.15571
  • 42.15571
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.16e4
  • 3.16e4
  • 3.88e4
41.70346
  • 41.70346
  • 28.39609
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.16e4
  • 3.16e4
  • 3.17e4
  • 3.76e4
41.65132
  • 41.65132
  • 41.53991
  • 30.57782
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000104life cycle
3.17e4
  • 3.17e4
41.50918
  • 41.50918
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
3.17e4
  • 3.17e4
41.50406
  • 41.50406
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.17e4
  • 3.17e4
41.48588
  • 41.48588
AEIR
  • AEIR
UBERON:0000014zone of skin
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
3.18e4
  • 3.18e4
  • 3.19e4
  • 3.20e4
41.24254
  • 41.24254
  • 41.05282
  • 40.85489
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002358peritoneum
  • UBERON:0000104life cycle
3.19e4
  • 3.19e4
41.13085
  • 41.13085
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • HsapDv:0000092human middle aged stage (human)
3.19e4
  • 3.19e4
41.03945
  • 41.03945
AEIR
  • AEIR
UBERON:0001874putamen
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.20e4
  • 3.20e4
  • 4.31e4
40.83078
  • 40.83078
  • 20.45827
AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.24e4
  • 3.24e4
  • 3.26e4
  • 3.46e4
  • 3.66e4
  • 3.68e4
40.11552
  • 40.11552
  • 39.86956
  • 36.05144
  • 32.39013
  • 31.94946
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002345descending thoracic aorta
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.24e4
  • 3.24e4
  • 3.98e4
40.09476
  • 40.09476
  • 26.46393
AEIR
  • AEIR
  • AEIR
UBERON:0001515thoracic aorta
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.36e4
  • 3.36e4
  • 3.43e4
  • 4.51e4
  • 4.54e4
37.96165
  • 37.96165
  • 36.70165
  • 16.76641
  • 16.12943
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
3.38e4
  • 3.38e4
  • 3.51e4
  • 3.58e4
  • 3.86e4
  • 4.06e4
37.65440
  • 37.65440
  • 35.15388
  • 33.86928
  • 28.63477
  • 25.02959
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.38e4
  • 3.38e4
  • 4.06e4
  • 4.08e4
  • 4.27e4
37.60187
  • 37.60187
  • 25.02793
  • 24.70226
  • 21.11038
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.41e4
  • 3.41e4
  • 3.89e4
37.01132
  • 37.01132
  • 28.07516
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.52e4
  • 3.52e4
  • 3.62e4
  • 3.65e4
  • 3.78e4
  • 4.43e4
34.95545
  • 34.95545
  • 33.15833
  • 32.52560
  • 30.12372
  • 18.09088
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.54e4
  • 3.54e4
  • 3.86e4
34.69267
  • 34.69267
  • 28.78365
AEIR
  • AEIR
  • AEIR
UBERON:0002119left ovary
  • HsapDv:0000087human adult stage (human)
3.67e4
  • 3.67e4
32.20616
  • 32.20616
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.68e4
  • 3.68e4
  • 3.72e4
32.02931
  • 32.02931
  • 31.34001
AEIR
  • AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.75e4
  • 3.75e4
  • 3.92e4
30.71813
  • 30.71813
  • 27.65531
AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000087human adult stage (human)
3.78e4
  • 3.78e4
30.18911
  • 30.18911
AEIR
  • AEIR
UBERON:0001120left lobe of thyroid gland
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.82e4
  • 3.82e4
  • 3.86e4
  • 4.27e4
29.50541
  • 29.50541
  • 28.65754
  • 21.09191
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.89e4
  • 3.89e4
  • 4.21e4
28.12221
  • 28.12221
  • 22.30960
AEIR
  • AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.94e4
  • 3.94e4
  • 4.11e4
  • 4.19e4
27.25991
  • 27.25991
  • 24.11748
  • 22.68939
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.94e4
  • 3.94e4
  • 4.06e4
  • 4.16e4
  • 4.22e4
  • 4.23e4
27.25173
  • 27.25173
  • 25.03774
  • 23.13929
  • 21.98919
  • 21.81401
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.98e4
  • 3.98e4
  • 4.01e4
  • 4.03e4
26.49180
  • 26.49180
  • 26.00026
  • 25.60891
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.98e4
  • 3.98e4
  • 4.07e4
  • 4.15e4
26.41952
  • 26.41952
  • 24.91139
  • 23.38738
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.05e4
  • 4.05e4
  • 4.06e4
  • 4.15e4
25.17952
  • 25.17952
  • 24.95883
  • 23.40136
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.08e4
  • 4.08e4
  • 4.09e4
  • 4.22e4
24.69000
  • 24.69000
  • 24.43254
  • 21.97831
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.09e4
  • 4.09e4
  • 4.16e4
24.43587
  • 24.43587
  • 23.16349
AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.32e4
  • 4.32e4
  • 4.40e4
20.16406
  • 20.16406
  • 18.75891
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSG00000258583 (LINC01500)
HGNCHGNC:51166 (LINC01500)

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