H. sapiens Gene: LINC01397 - ENSG00000258673 - Homo sapiens (human)

Gene Information

Ensembl IDENSG00000258673
NameLINC01397
Descriptionlong intergenic non-protein coding RNA 1397 [Source:HGNC Symbol;Acc:HGNC:50677]
OrganismHomo sapiens (human)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0001898hypothalamus
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.31e4
  • 1.31e4
  • 2.85e4
  • 3.09e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005200thoracic mammary gland
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.54e4
  • 1.54e4
  • 2.09e4
  • 2.30e4
  • 2.67e4
  • 3.47e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
1.83e4
  • 1.83e4
  • 2.13e4
  • 2.47e4
  • 2.62e4
  • 3.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:000009465-79 year-old human stage (human)
1.87e4
  • 1.87e4
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.95e4
  • 1.95e4
  • 1.99e4
  • 2.18e4
  • 2.22e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001199mucosa of stomach
  • HsapDv:0000091human late adulthood stage (human)
2.00e4
  • 2.00e4
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.00e4
  • 2.00e4
  • 2.71e4
  • 2.74e4
  • 2.89e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001303left uterine tube
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.05e4
  • 2.05e4
  • 2.12e4
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • HsapDv:000009465-79 year-old human stage (human)
2.06e4
  • 2.06e4
AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.06e4
  • 2.06e4
  • 2.38e4
  • 2.53e4
  • 2.60e4
  • 2.62e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.14e4
  • 2.14e4
  • 2.31e4
  • 2.47e4
  • 2.64e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.18e4
  • 2.18e4
  • 2.22e4
  • 2.55e4
  • 2.84e4
  • 2.88e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.18e4
  • 2.18e4
  • 2.18e4
  • 2.20e4
  • 2.35e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.19e4
  • 2.19e4
  • 2.42e4
  • 2.56e4
  • 2.61e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.24e4
  • 2.24e4
  • 2.40e4
  • 2.56e4
  • 2.93e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • HsapDv:0000092human middle aged stage (human)
2.28e4
  • 2.28e4
AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.30e4
  • 2.30e4
  • 2.49e4
  • 2.64e4
  • 2.71e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.33e4
  • 2.33e4
  • 3.43e4
  • 3.76e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009853body of uterus
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.36e4
  • 2.36e4
  • 2.41e4
  • 2.66e4
  • 2.82e4
  • 3.19e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.37e4
  • 2.37e4
  • 2.41e4
  • 2.43e4
  • 2.54e4
  • 2.61e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.44e4
  • 2.44e4
  • 2.61e4
  • 3.10e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.45e4
  • 2.45e4
  • 2.46e4
  • 2.50e4
  • 2.51e4
  • 2.54e4
  • 2.62e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.46e4
  • 2.46e4
  • 2.53e4
  • 2.58e4
  • 2.58e4
  • 2.68e4
  • 2.96e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.50e4
  • 2.50e4
  • 2.52e4
  • 2.54e4
  • 2.60e4
  • 2.93e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.50e4
  • 2.50e4
  • 2.57e4
  • 2.84e4
  • 3.00e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.55e4
  • 2.55e4
  • 2.93e4
  • 2.97e4
  • 3.08e4
  • 3.28e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002118right ovary
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.57e4
  • 2.57e4
  • 2.92e4
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.59e4
  • 2.59e4
  • 2.65e4
  • 2.66e4
  • 2.70e4
  • 2.86e4
  • 2.86e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.60e4
  • 2.60e4
  • 2.81e4
  • 2.84e4
  • 2.86e4
  • 2.98e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.89e4
  • 2.89e4
  • 3.21e4
  • 3.66e4
  • 3.77e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.92e4
  • 2.92e4
  • 2.97e4
  • 3.20e4
  • 3.20e4
  • 3.26e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.98e4
  • 2.98e4
  • 2.99e4
  • 3.01e4
  • 3.19e4
  • 3.24e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001515thoracic aorta
  • HsapDv:000009025-44 year-old human stage (human)
3.02e4
  • 3.02e4
AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.25e4
  • 3.25e4
  • 3.30e4
  • 3.53e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.26e4
  • 3.26e4
  • 3.40e4
  • 3.57e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002119left ovary
  • HsapDv:0000088human early adulthood stage (human)
3.26e4
  • 3.26e4
AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.30e4
  • 3.30e4
  • 3.47e4
AEIR
  • AEIR
  • AEIR
UBERON:0002367prostate gland
  • HsapDv:0000091human late adulthood stage (human)
3.36e4
  • 3.36e4
AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:0000092human middle aged stage (human)
3.38e4
  • 3.38e4
AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.42e4
  • 3.42e4
  • 3.94e4
AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.43e4
  • 3.43e4
  • 3.86e4
AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.44e4
  • 3.44e4
  • 3.48e4
  • 3.63e4
  • 3.65e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.56e4
  • 3.56e4
  • 3.68e4
AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000087human adult stage (human)
3.73e4
  • 3.73e4
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • HsapDv:0000091human late adulthood stage (human)
3.75e4
  • 3.75e4
AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000091human late adulthood stage (human)
3.86e4
  • 3.86e4
AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:0000091human late adulthood stage (human)
4.00e4
  • 4.00e4
AEIR
  • AEIR
UBERON:0000178blood
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.08e4
  • 4.08e4
  • 4.11e4
  • 4.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data: