H. sapiens Gene: TRAV28 - ENSG00000258835 - Homo sapiens (human)

General information

Ensembl IDENSG00000258835
NameTRAV28
DescriptionT cell receptor alpha variable 28 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:12126]
OrganismHomo sapiens (human)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002038substantia nigra
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
1.91e4
  • 1.91e4
  • 4.58e4
  • 4.63e4
65.23374
  • 65.23374
  • 16.84283
  • 15.83043
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.82e4
  • 2.82e4
  • 4.30e4
48.85039
  • 48.85039
  • 21.88531
AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.61e4
  • 3.61e4
  • 3.66e4
  • 3.92e4
  • 4.11e4
  • 4.31e4
34.37024
  • 34.37024
  • 33.57869
  • 28.86849
  • 25.27754
  • 21.74698
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
3.74e4
  • 3.74e4
  • 4.00e4
  • 4.38e4
  • 4.49e4
32.16116
  • 32.16116
  • 27.28962
  • 20.38551
  • 18.50301
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000113post-juvenile adult stage
3.74e4
  • 3.74e4
32.12411
  • 32.12411
AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000199fifth LMP month human stage (human)
3.85e4
  • 3.85e4
30.00492
  • 30.00492
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.94e4
  • 3.94e4
28.48687
  • 28.48687
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.01e4
  • 4.01e4
  • 4.08e4
  • 4.20e4
  • 4.68e4
27.23535
  • 27.23535
  • 25.89456
  • 23.68419
  • 14.95799
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001052rectum
  • UBERON:0000113post-juvenile adult stage
4.02e4
  • 4.02e4
26.95004
  • 26.95004
AEIR
  • AEIR
UBERON:0000178blood
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.07e4
  • 4.07e4
  • 4.12e4
  • 4.16e4
  • 4.22e4
  • 4.26e4
26.00552
  • 26.00552
  • 25.26732
  • 24.44203
  • 23.34510
  • 22.64856
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.08e4
  • 4.08e4
  • 4.23e4
  • 4.25e4
  • 4.25e4
  • 4.51e4
25.98391
  • 25.98391
  • 23.21276
  • 22.86739
  • 22.78835
  • 18.13741
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.08e4
  • 4.08e4
  • 4.36e4
  • 4.57e4
25.82442
  • 25.82442
  • 20.82888
  • 16.95807
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007220late embryonic stage
  • HsapDv:0000087human adult stage (human)
4.24e4
  • 4.24e4
  • 4.41e4
  • 4.50e4
  • 4.60e4
22.94548
  • 22.94548
  • 19.95957
  • 18.28030
  • 16.44800
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.25e4
  • 4.25e4
  • 4.55e4
  • 4.55e4
22.87569
  • 22.87569
  • 17.44216
  • 17.42765
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.25e4
  • 4.25e4
  • 4.35e4
  • 4.47e4
  • 4.49e4
  • 4.49e4
22.73968
  • 22.73968
  • 20.96074
  • 18.79901
  • 18.47445
  • 18.41944
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.27e4
  • 4.27e4
  • 4.38e4
  • 4.52e4
  • 4.59e4
22.39056
  • 22.39056
  • 20.39107
  • 17.89666
  • 16.71120
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.28e4
  • 4.28e4
  • 4.28e4
22.27151
  • 22.27151
  • 22.20457
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
4.30e4
  • 4.30e4
21.93240
  • 21.93240
AEIR
  • AEIR
CL:0000576monocyte
  • UBERON:0000113post-juvenile adult stage
4.31e4
  • 4.31e4
21.69529
  • 21.69529
AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.34e4
  • 4.34e4
  • 4.42e4
  • 4.47e4
21.12522
  • 21.12522
  • 19.63833
  • 18.84852
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000113post-juvenile adult stage
4.38e4
  • 4.38e4
20.51867
  • 20.51867
AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.38e4
  • 4.38e4
  • 4.42e4
20.42305
  • 20.42305
  • 19.81608
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.41e4
  • 4.41e4
  • 4.52e4
  • 4.53e4
19.95042
  • 19.95042
  • 17.95774
  • 17.76487
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.46e4
  • 4.46e4
  • 4.51e4
  • 4.55e4
  • 4.55e4
19.01033
  • 19.01033
  • 18.12588
  • 17.40594
  • 17.33475
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.47e4
  • 4.47e4
  • 4.51e4
18.89457
  • 18.89457
  • 18.00498
AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000087human adult stage (human)
4.49e4
  • 4.49e4
18.54341
  • 18.54341
AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.55e4
  • 4.55e4
  • 4.72e4
17.37579
  • 17.37579
  • 14.34971
AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.55e4
  • 4.55e4
  • 4.60e4
  • 4.61e4
17.29087
  • 17.29087
  • 16.40236
  • 16.28319
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSG00000258835 (TRAV28)
HGNCHGNC:12126 (TRAV28)
OncoMXTRAV28 (TRAV28)

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