H. sapiens Gene: TRAV28 - ENSG00000258835 - Homo sapiens (human)

General information

Ensembl IDENSG00000258835
NameTRAV28
DescriptionT cell receptor alpha variable 28 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:12126]
OrganismHomo sapiens (human)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002038substantia nigra
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
1.91e4
  • 1.91e4
  • 4.55e4
  • 4.60e4
64.64036
  • 64.64036
  • 16.03864
  • 15.01223
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.29e4
  • 3.29e4
  • 3.98e4
  • 4.46e4
39.25616
  • 39.25616
  • 26.51169
  • 17.71026
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.60e4
  • 3.60e4
  • 3.64e4
  • 3.90e4
  • 4.09e4
  • 4.28e4
33.56038
  • 33.56038
  • 32.74160
  • 28.03973
  • 24.44215
  • 20.91394
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000199fifth LMP month human stage (human)
3.83e4
  • 3.83e4
29.26006
  • 29.26006
AEIR
  • AEIR
UBERON:0000178blood
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.05e4
  • 4.05e4
  • 4.13e4
  • 4.19e4
  • 4.23e4
25.26078
  • 25.26078
  • 23.63336
  • 22.59086
  • 21.89139
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.05e4
  • 4.05e4
  • 4.20e4
  • 4.22e4
  • 4.23e4
  • 4.47e4
25.21942
  • 25.21942
  • 22.42916
  • 21.99756
  • 21.90633
  • 17.34846
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.06e4
  • 4.06e4
  • 4.18e4
  • 4.65e4
25.06812
  • 25.06812
  • 22.86158
  • 14.11873
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001626left coronary artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.06e4
  • 4.06e4
  • 4.33e4
  • 4.54e4
25.06062
  • 25.06062
  • 20.02543
  • 16.14203
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000199fifth LMP month human stage (human)
4.21e4
  • 4.21e4
22.18503
  • 22.18503
AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.23e4
  • 4.23e4
  • 4.32e4
  • 4.44e4
  • 4.46e4
  • 4.46e4
21.94097
  • 21.94097
  • 20.14439
  • 17.99073
  • 17.65898
  • 17.60433
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.24e4
  • 4.24e4
  • 4.35e4
  • 4.49e4
  • 4.55e4
21.60259
  • 21.60259
  • 19.58615
  • 17.09001
  • 15.89665
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.25e4
  • 4.25e4
  • 4.26e4
21.46365
  • 21.46365
  • 21.40212
AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.31e4
  • 4.31e4
  • 4.39e4
  • 4.44e4
20.31100
  • 20.31100
  • 18.82914
  • 18.00997
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.35e4
  • 4.35e4
  • 4.39e4
19.60157
  • 19.60157
  • 18.99607
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.38e4
  • 4.38e4
  • 4.49e4
  • 4.50e4
19.13379
  • 19.13379
  • 17.13735
  • 16.88784
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.43e4
  • 4.43e4
  • 4.48e4
  • 4.52e4
  • 4.52e4
18.17644
  • 18.17644
  • 17.29390
  • 16.57948
  • 16.51182
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.44e4
  • 4.44e4
  • 4.48e4
18.06432
  • 18.06432
  • 17.18085
AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000087human adult stage (human)
4.46e4
  • 4.46e4
17.62941
  • 17.62941
AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.52e4
  • 4.52e4
  • 4.68e4
16.57036
  • 16.57036
  • 13.53123
AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.52e4
  • 4.52e4
  • 4.58e4
  • 4.58e4
16.45894
  • 16.45894
  • 15.47048
  • 15.45399
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSG00000258835 (TRAV28)
HGNCHGNC:12126 (TRAV28)

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