H. sapiens Gene: SSX4 - ENSG00000268009 - Homo sapiens (human)

General information

Ensembl IDENSG00000268009
NameSSX4
Descriptionsynovial sarcoma, X breakpoint 4 [Source:HGNC Symbol;Acc:HGNC:11338]
OrganismHomo sapiens (human)
Synonym(s)a8myd4, b2rpe3, ct5.4, q3syd4, q5jqz0, q9uju9, ssx4a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
72.66718
  • 72.66718
AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
1.96e4
  • 1.96e4
  • 2.01e4
  • 2.11e4
  • 2.54e4
  • 2.66e4
64.44190
  • 64.44190
  • 63.45425
  • 61.72891
  • 53.89421
  • 51.68839
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
  • 2.72e4
  • 2.76e4
  • 2.86e4
  • 3.10e4
  • 3.75e4
  • 4.16e4
64.17620
  • 64.17620
  • 50.66828
  • 49.88090
  • 48.00952
  • 43.69983
  • 31.92038
  • 24.45541
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.40e4
  • 2.40e4
  • 2.49e4
  • 2.61e4
  • 2.62e4
  • 2.62e4
  • 2.87e4
56.36468
  • 56.36468
  • 54.71363
  • 52.60080
  • 52.38190
  • 52.38117
  • 47.87162
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001515thoracic aorta
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.67e4
  • 2.67e4
  • 3.11e4
51.54624
  • 51.54624
  • 43.52666
AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
3.06e4
  • 3.06e4
  • 3.35e4
  • 3.54e4
  • 3.55e4
  • 3.63e4
44.44592
  • 44.44592
  • 39.07366
  • 35.67344
  • 35.59803
  • 34.12114
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
3.12e4
  • 3.12e4
  • 3.93e4
43.35495
  • 43.35495
  • 28.61810
AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.23e4
  • 3.23e4
  • 3.33e4
  • 3.33e4
41.26016
  • 41.26016
  • 39.52997
  • 39.43970
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.54e4
  • 3.54e4
  • 3.86e4
  • 4.04e4
35.77578
  • 35.77578
  • 29.92340
  • 26.68548
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.70e4
  • 3.70e4
32.75019
  • 32.75019
AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.74e4
  • 3.74e4
  • 3.99e4
32.09664
  • 32.09664
  • 27.53418
AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.74e4
  • 3.74e4
  • 3.80e4
32.09618
  • 32.09618
  • 30.95314
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.80e4
  • 3.80e4
  • 4.26e4
30.99622
  • 30.99622
  • 22.64378
AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000087human adult stage (human)
3.82e4
  • 3.82e4
30.62046
  • 30.62046
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS35240 (CCDS35240.1), CCDS43934 (CCDS43934.1)
EMBLAF196972, AL606490, BC005325, BC103864, BC137394, BC137395, U90841
EnsemblENSG00000268009 (SSX4)
HGNCHGNC:11338 (SSX4)
OncoMXSSX4 (SSX4)
Uniprot/SWISSPROTO60224, SSX4_HUMAN

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