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G. gallus Gene: TRNAU1AP - ENSGALG00000001310 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000001310
NameTRNAU1AP
DescriptiontRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30813]
OrganismGallus gallus (chicken)
Synonym(s)flj20503, secp43, trspap1
Orthologs(s)26 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.43e3
  • 2.43e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.51e3
  • 4.51e3
  • 4.62e3
71.97
  • 71.97
  • 71.31
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
4.80e3
  • 4.80e3
70.21
  • 70.21
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
63.85
  • 63.85
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
60.88
  • 60.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.43e3
  • 6.43e3
  • 6.53e3
60.06
  • 60.06
  • 59.47
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
6.52e3
  • 6.52e3
59.52
  • 59.52
AEIR
  • AEIR
UBERON:0002113kidney
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
7.21e3
  • 7.21e3
  • 7.65e3
55.21
  • 55.21
  • 52.53
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.43e3
  • 7.43e3
  • 7.98e3
53.89
  • 53.89
  • 50.47
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
8.00e3
  • 8.00e3
50.32
  • 50.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.07e3
  • 8.07e3
49.91
  • 49.91
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.65e3
  • 8.65e3
46.30
  • 46.30
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.83e3
  • 8.83e3
45.16
  • 45.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSGALG00000001310.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSGALG00000001310.

Cross-references

EnsemblENSGALG00000001310 (TRNAU1AP)
HGNCHGNC:30813 (TRNAU1AP)
EMBLAADN03008189
Uniprot/SPTREMBLE1BZH5, E1BZH5_CHICK

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