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G. gallus Gene: SEC11A - ENSGALG00000002462 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000002462
NameSEC11A
Descriptionsignal peptidase complex catalytic subunit SEC11A [Source:RefSeq peptide;Acc:NP_001005802]
OrganismGallus gallus (chicken)
Synonym(s)sec11l1, sec11l1|sec11-like 1|microsomal signal peptidase 18 kda subunit|signal peptidase complex catalytic s
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
828
  • 828
94.86
  • 94.86
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
92.20
  • 92.20
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.36e3
  • 1.36e3
91.56
  • 91.56
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
91.39
  • 91.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
90.71
  • 90.71
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
1.52e3
  • 1.52e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.61e3
  • 1.61e3
  • 2.07e3
89.99
  • 89.99
  • 87.14
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.66e3
  • 1.66e3
  • 2.14e3
89.71
  • 89.71
  • 86.69
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.77e3
  • 1.77e3
  • 2.57e3
88.99
  • 88.99
  • 84.03
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.97e3
  • 1.97e3
  • 2.75e3
87.75
  • 87.75
  • 82.91
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.08e3
  • 2.08e3
87.08
  • 87.08
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.26e3
  • 3.26e3
79.75
  • 79.75
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.34e3
  • 3.34e3
  • 4.90e3
79.26
  • 79.26
  • 69.57
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
5.53e3
  • 5.53e3
65.67
  • 65.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSGALG00000002462.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSGALG00000002462.

Cross-references

EnsemblENSGALG00000002462 (SEC11A)
EMBLAADN03006065, AJ719331
Uniprot/SPTREMBLQ5ZMQ3, Q5ZMQ3_CHICK

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