G. gallus Gene: TPM1 - ENSGALG00000003521 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000003521
NameTPM1
DescriptionTropomyosin alpha-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P04268]
OrganismGallus gallus (chicken)
Synonym(s)alpha-ftm, alpha-ftm|alpha-tropomyosin 1|alpha-tropomyosin 2|alpha-tropomyosin of skeletal fast muscle|tropomyo, p02559, p08942, p18441, p18442, p49436, p49438, p49439, q540n4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
16.2
  • 16.2
99.90518
  • 99.90518
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
41.7
  • 41.7
99.74697
  • 99.74697
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
105
  • 105
99.35189
  • 99.35189
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
181
  • 181
98.88067
  • 98.88067
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
295
  • 295
98.17103
  • 98.17103
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
687
  • 687
  • 709
95.73017
  • 95.73017
  • 95.59591
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.26e3
  • 1.26e3
  • 1.94e3
92.17520
  • 92.17520
  • 87.93865
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.43e3
  • 1.43e3
  • 1.63e3
91.09525
  • 91.09525
  • 89.87719
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.67e3
  • 1.67e3
  • 1.80e3
89.62832
  • 89.62832
  • 88.82399
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
2.20e3
  • 2.20e3
86.29982
  • 86.29982
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.88e3
  • 3.88e3
  • 4.93e3
75.88782
  • 75.88782
  • 69.30312
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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