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G. gallus Gene: BAP1 - ENSGALG00000004366 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000004366
NameBAP1
Descriptionubiquitin carboxyl-terminal hydrolase BAP1 [Source:RefSeq peptide;Acc:NP_001025761]
OrganismGallus gallus (chicken)
Synonym(s)brca1-associated protein 1|ubiquitin carboxyl-terminal hydrolase bap1
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
2.12e3
  • 2.12e3
86.84
  • 86.84
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
86.09
  • 86.09
AEIR
  • AEIR
UBERON:0000948heart
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
2.55e3
  • 2.55e3
  • 2.67e3
84.16
  • 84.16
  • 83.45
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
2.62e3
  • 2.62e3
83.77
  • 83.77
AEIR
  • AEIR
UBERON:0002113kidney
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
2.91e3
  • 2.91e3
  • 3.56e3
81.93
  • 81.93
  • 77.88
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
2.93e3
  • 2.93e3
  • 4.57e3
81.80
  • 81.80
  • 71.66
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
3.04e3
  • 3.04e3
  • 3.23e3
81.12
  • 81.12
  • 79.98
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.24e3
  • 3.24e3
79.89
  • 79.89
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.35e3
  • 3.35e3
79.20
  • 79.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.68e3
  • 3.68e3
77.15
  • 77.15
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.36e3
  • 4.36e3
72.95
  • 72.95
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
4.88e3
  • 4.88e3
69.70
  • 69.70
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
5.38e3
  • 5.38e3
66.57
  • 66.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSGALG00000004366.

Cross-references

EnsemblENSGALG00000004366 (BAP1)
EMBLAADN03006446
Uniprot/SPTREMBLF1NVF5, F1NVF5_CHICK

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