G. gallus Gene: TIMP4 - ENSGALG00000004969 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000004969
NameTIMP4
DescriptionTIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
OrganismGallus gallus (chicken)
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.72e3
  • 1.72e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.44e3
  • 2.44e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0002113kidney
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
  • 4.39e3
79.08
  • 79.08
  • 72.78
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.35e3
  • 4.35e3
  • 4.49e3
72.97
  • 72.97
  • 72.15
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.51e3
  • 4.51e3
72.02
  • 72.02
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.39e3
  • 5.39e3
66.51
  • 66.51
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
6.78e3
  • 6.78e3
57.89
  • 57.89
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
7.41e3
  • 7.41e3
54.02
  • 54.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.81e3
  • 7.81e3
  • 8.37e3
51.50
  • 51.50
  • 48.01
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.95e3
  • 7.95e3
  • 8.24e3
50.62
  • 50.62
  • 48.82
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
37.22
  • 37.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
34.93
  • 34.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSGALG00000004969.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSGALG00000004969.

Cross-references

EnsemblENSGALG00000004969 (TIMP4)
HGNCHGNC:11823 (TIMP4)
EMBLAADN03006485
Uniprot/SPTREMBLF1NIB5, F1NIB5_CHICK

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