G. gallus Gene: AP1S3 - ENSGALG00000005171 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000005171
NameAP1S3
DescriptionAP-1 complex subunit sigma-3 [Source:RefSeq peptide;Acc:NP_001025179]
OrganismGallus gallus (chicken)
Synonym(s)ap-1 complex subunit sigma-3|adaptor-related protein complex ap-1, sigma 3 subunit
Orthologs(s)18 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
90.63
  • 90.63
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.61e3
  • 2.61e3
  • 3.22e3
83.83
  • 83.83
  • 79.99
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.61e3
  • 2.61e3
83.82
  • 83.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
5.83e3
  • 5.83e3
  • 7.69e3
63.78
  • 63.78
  • 52.27
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
5.86e3
  • 5.86e3
  • 6.97e3
63.64
  • 63.64
  • 56.72
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
63.47
  • 63.47
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.89e3
  • 8.89e3
44.78
  • 44.78
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
9.86e3
  • 9.86e3
38.81
  • 38.81
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.02e4
  • 1.02e4
36.82
  • 36.82
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
32.90
  • 32.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSGALG00000005171.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSGALG00000005171.

Cross-references

EnsemblENSGALG00000005171 (AP1S3)
EMBLAADN03005879
Uniprot/SPTREMBLE1BWN8, E1BWN8_CHICK

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