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G. gallus Gene: PPDPF - ENSGALG00000005849 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000005849
NamePPDPF
Descriptionchromosome 20 open reading frame 149 [Source:RefSeq peptide;Acc:NP_001183966]
OrganismGallus gallus (chicken)
Synonym(s)c20orf149
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
58.5
  • 58.5
  • 59.3
99.64
  • 99.64
  • 99.64
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
92.6
  • 92.6
  • 106
99.43
  • 99.43
  • 99.35
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
126
  • 126
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0000948heart
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
128
  • 128
  • 163
99.21
  • 99.21
  • 99.00
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
148
  • 148
99.09
  • 99.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
403
  • 403
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
792
  • 792
95.09
  • 95.09
AEIR
  • AEIR
UBERON:0000955brain
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
998
  • 998
  • 2.60e3
93.81
  • 93.81
  • 83.89
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.23e3
  • 1.23e3
92.36
  • 92.36
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
91.18
  • 91.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.15e3
  • 2.15e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
2.99e3
  • 2.99e3
  • 6.65e3
81.45
  • 81.45
  • 58.74
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
8.58e3
  • 8.58e3
46.72
  • 46.72
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
8.99e3
  • 8.99e3
44.17
  • 44.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota12 species14 genesCompare expression
Tetrapoda13 species15 genesCompare expression

Orthology information comes from OMA : ENSGALG00000005849.

Cross-references

EnsemblENSGALG00000005849 (PPDPF)
EMBLAADN03007810
Uniprot/SPTREMBLF1NJL7, F1NJL7_CHICK

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