G. gallus Gene: SCN5A - ENSGALG00000006112 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000006112
NameSCN5A
Descriptionsodium channel, voltage gated, type V alpha subunit [Source:HGNC Symbol;Acc:HGNC:10593]
OrganismGallus gallus (chicken)
Synonym(s)cdcd2, cmd1e, cmpd2, hb1, hb2, hbbd, hh1, iccd, ivf, lqt3, nav1.5, pfhb1, sss1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
2.90e3
  • 2.90e3
  • 3.35e3
81.99173
  • 81.99173
  • 79.18105
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
9.88e3
  • 9.88e3
38.54476
  • 38.54476
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
37.20550
  • 37.20550
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
28.24557
  • 28.24557
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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