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G. gallus Gene: GTF3C3 - ENSGALG00000007958 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000007958
NameGTF3C3
Descriptiongeneral transcription factor 3C polypeptide 3 [Source:RefSeq peptide;Acc:NP_001006515]
OrganismGallus gallus (chicken)
Synonym(s)general transcription factor 3c polypeptide 3
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.79e3
  • 1.79e3
88.92
  • 88.92
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.96e3
  • 2.96e3
81.64
  • 81.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.06e3
  • 4.06e3
  • 5.44e3
74.78
  • 74.78
  • 66.20
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.58e3
  • 5.58e3
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.08e3
  • 6.08e3
  • 7.00e3
62.25
  • 62.25
  • 56.54
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
60.49
  • 60.49
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.41e3
  • 6.41e3
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
6.46e3
  • 6.46e3
59.89
  • 59.89
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.71e3
  • 6.71e3
58.36
  • 58.36
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
6.82e3
  • 6.82e3
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.86e3
  • 6.86e3
  • 8.30e3
57.41
  • 57.41
  • 48.50
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
6.92e3
  • 6.92e3
  • 7.18e3
57.02
  • 57.02
  • 55.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.18e3
  • 7.18e3
  • 7.46e3
55.42
  • 55.42
  • 53.69
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.71e3
  • 7.71e3
52.16
  • 52.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSGALG00000007958.

Cross-references

EnsemblENSGALG00000007958 (GTF3C3)
EMBLAADN03005344
Uniprot/SPTREMBLF1NSH9, F1NSH9_CHICK

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