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G. gallus Gene: SNAI1 - ENSGALG00000008018 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000008018
NameSNAI1
Descriptionsnail homolog 1 [Source:RefSeq peptide;Acc:NP_990473]
OrganismGallus gallus (chicken)
Synonym(s)snail homolog 1|snail like protein
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
5.13e3
  • 5.13e3
  • 5.96e3
68.16
  • 68.16
  • 62.99
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.84e3
  • 6.84e3
57.56
  • 57.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.88e3
  • 6.88e3
57.31
  • 57.31
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
7.50e3
  • 7.50e3
53.43
  • 53.43
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
7.83e3
  • 7.83e3
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0002107liver
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
  • 8.71e3
50.79
  • 50.79
  • 45.92
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.38e3
  • 8.38e3
47.98
  • 47.98
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
9.21e3
  • 9.21e3
  • 1.01e4
42.81
  • 42.81
  • 37.45
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
9.96e3
  • 9.96e3
  • 1.02e4
38.15
  • 38.15
  • 36.91
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
31.10
  • 31.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
25.95
  • 25.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSGALG00000008018.

Cross-references

EnsemblENSGALG00000008018 (SNAI1)
EMBLAADN03007775, Y09905
Uniprot/SPTREMBLO12939, O12939_CHICK

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