G. gallus Gene: COBRA1 - ENSGALG00000008532 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000008532
NameCOBRA1
Descriptionnegative elongation factor B [Source:RefSeq peptide;Acc:NP_001006202]
OrganismGallus gallus (chicken)
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.26e3
  • 2.26e3
85.95
  • 85.95
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.35e3
  • 2.35e3
85.45
  • 85.45
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.55e3
  • 2.55e3
84.20
  • 84.20
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.65e3
  • 2.65e3
83.56
  • 83.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
2.65e3
  • 2.65e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.66e3
  • 2.66e3
83.47
  • 83.47
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.81e3
  • 2.81e3
  • 3.03e3
82.53
  • 82.53
  • 81.19
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.07e3
  • 3.07e3
  • 4.79e3
80.94
  • 80.94
  • 70.28
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.13e3
  • 3.13e3
80.58
  • 80.58
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.20e3
  • 3.20e3
  • 4.67e3
80.16
  • 80.16
  • 71.04
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.61e3
  • 3.61e3
  • 4.89e3
77.62
  • 77.62
  • 69.66
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.14e3
  • 4.14e3
74.33
  • 74.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
5.46e3
  • 5.46e3
  • 6.68e3
66.09
  • 66.09
  • 58.54
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
6.44e3
  • 6.44e3
60.02
  • 60.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria22 species24 genesCompare expression

Orthology information comes from OMA : ENSGALG00000008532.

Cross-references

EnsemblENSGALG00000008532 (COBRA1)
EMBLAADN03007280, AJ719725
Uniprot/SPTREMBLQ5ZLK9, Q5ZLK9_CHICK

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