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G. gallus Gene: C1D - ENSGALG00000008765 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000008765
NameC1D
Descriptionnuclear nucleic acid-binding protein C1D [Source:RefSeq peptide;Acc:NP_001026207]
OrganismGallus gallus (chicken)
Synonym(s)c1d nuclear receptor co-repressor|nuclear nucleic acid-binding protein c1d
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
845
  • 845
94.76
  • 94.76
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
2.15e3
  • 2.15e3
86.69
  • 86.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.15e3
  • 2.15e3
  • 3.79e3
86.67
  • 86.67
  • 76.48
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.15e3
  • 2.15e3
86.64
  • 86.64
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.18e3
  • 2.18e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.13e3
  • 3.13e3
  • 4.82e3
80.58
  • 80.58
  • 70.09
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.51e3
  • 3.51e3
  • 4.91e3
78.19
  • 78.19
  • 69.55
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.75e3
  • 3.75e3
76.70
  • 76.70
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.89e3
  • 3.89e3
75.83
  • 75.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.19e3
  • 4.19e3
74.01
  • 74.01
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.57e3
  • 4.57e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
5.77e3
  • 5.77e3
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.06e3
  • 6.06e3
  • 7.64e3
62.36
  • 62.36
  • 52.56
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.71e3
  • 6.71e3
  • 7.55e3
58.33
  • 58.33
  • 53.11
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species16 genesCompare expression
Tetrapoda15 species17 genesCompare expression
Euteleostomi16 species18 genesCompare expression

Orthology information comes from OMA : ENSGALG00000008765.

Cross-references

EnsemblENSGALG00000008765 (C1D)
EMBLAADN03003542
Uniprot/SPTREMBLF1NRP5, F1NRP5_CHICK

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