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G. gallus Gene: LRSAM1 - ENSGALG00000008819 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000008819
NameLRSAM1
Descriptionleucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
OrganismGallus gallus (chicken)
Synonym(s)cmt2p, flj31641
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.11e3
  • 3.11e3
  • 3.66e3
80.69
  • 80.69
  • 77.25
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.74e3
  • 3.74e3
  • 4.81e3
76.78
  • 76.78
  • 70.17
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
76.34
  • 76.34
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.19e3
  • 4.19e3
  • 4.61e3
73.99
  • 73.99
  • 71.39
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.22e3
  • 4.22e3
  • 5.35e3
73.79
  • 73.79
  • 66.76
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.34e3
  • 4.34e3
73.06
  • 73.06
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.26e3
  • 5.26e3
67.35
  • 67.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
5.26e3
  • 5.26e3
  • 6.07e3
67.35
  • 67.35
  • 62.30
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.60e3
  • 5.60e3
65.22
  • 65.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
5.73e3
  • 5.73e3
64.43
  • 64.43
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
5.85e3
  • 5.85e3
63.67
  • 63.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
58.74
  • 58.74
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
7.04e3
  • 7.04e3
56.29
  • 56.29
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
56.12
  • 56.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSGALG00000008819.

Cross-references

EnsemblENSGALG00000008819 (LRSAM1)
HGNCHGNC:25135 (LRSAM1)
EMBLAADN03007274
Uniprot/SPTREMBLE1BRU6, E1BRU6_CHICK

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