G. gallus Gene: SPTLC3 - ENSGALG00000009037 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000009037
NameSPTLC3
Descriptionserine palmitoyltransferase, long chain base subunit 3 [Source:HGNC Symbol;Acc:HGNC:16253]
OrganismGallus gallus (chicken)
Synonym(s)c20orf38, flj11112, hlcb2b, lcb2b, sptlc2l
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
36.46
  • 36.46
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
25.91
  • 25.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSGALG00000009037.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSGALG00000009037.

Cross-references

EnsemblENSGALG00000009037 (SPTLC3)
HGNCHGNC:16253 (SPTLC3)
EMBLAADN03003407
Uniprot/SPTREMBLF1NHR1, F1NHR1_CHICK

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