G. gallus Gene: COL1A2 - ENSGALG00000009641 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000009641
NameCOL1A2
Descriptioncollagen alpha-2(I) chain precursor [Source:RefSeq peptide;Acc:NP_001073182]
OrganismGallus gallus (chicken)
Synonym(s)alpha 2(i) collagen|alpha-2 type i collagen|alpha-2(1) collagen|collagen alpha 2(i) chain|collagen a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
327
  • 327
97.97715
  • 97.97715
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
917
  • 917
  • 1.59e3
94.31196
  • 94.31196
  • 90.16064
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
93.04393
  • 93.04393
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
92.29836
  • 92.29836
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
91.77627
  • 91.77627
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
87.16781
  • 87.16781
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.62e3
  • 2.62e3
83.76230
  • 83.76230
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.71e3
  • 2.71e3
  • 3.98e3
83.20314
  • 83.20314
  • 75.27393
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
  • 4.36e3
77.80223
  • 77.80223
  • 72.91117
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.85e3
  • 4.85e3
  • 5.57e3
69.92008
  • 69.92008
  • 65.43059
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
5.14e3
  • 5.14e3
68.08426
  • 68.08426
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
5.23e3
  • 5.23e3
67.52460
  • 67.52460
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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