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G. gallus Gene: HP1BP3 - ENSGALG00000010079 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000010079
NameHP1BP3
Descriptionheterochromatin protein 1-binding protein 3 [Source:RefSeq peptide;Acc:NP_001006560]
OrganismGallus gallus (chicken)
Synonym(s)heterochromatin protein 1-binding protein 3
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
635
  • 635
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
837
  • 837
94.81
  • 94.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
92.38
  • 92.38
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.32e3
  • 1.32e3
91.79
  • 91.79
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.53e3
  • 1.53e3
  • 2.92e3
90.54
  • 90.54
  • 81.86
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.70e3
  • 1.70e3
  • 2.98e3
89.48
  • 89.48
  • 81.51
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.84e3
  • 1.84e3
  • 2.98e3
88.60
  • 88.60
  • 81.53
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
2.08e3
  • 2.08e3
87.12
  • 87.12
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.19e3
  • 2.19e3
  • 3.38e3
86.41
  • 86.41
  • 79.01
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.25e3
  • 2.25e3
  • 2.68e3
86.02
  • 86.02
  • 83.38
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
2.79e3
  • 2.79e3
82.71
  • 82.71
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.99e3
  • 2.99e3
81.44
  • 81.44
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
79.06
  • 79.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSGALG00000010079.

Cross-references

EnsemblENSGALG00000010079 (HP1BP3)
EMBLAADN03008006
Uniprot/SPTREMBLF1N8H6, F1N8H6_CHICK

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