G. gallus Gene: SPTLC2 - ENSGALG00000010482 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000010482
NameSPTLC2
Descriptionserine palmitoyltransferase 2 [Source:RefSeq peptide;Acc:NP_001006483]
OrganismGallus gallus (chicken)
Synonym(s)serine palmitoyltransferase 2
Orthologs(s)27 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.22e3
  • 3.22e3
80.04
  • 80.04
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
3.47e3
  • 3.47e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
  • 3.91e3
77.79
  • 77.79
  • 75.74
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
3.80e3
  • 3.80e3
  • 3.91e3
76.40
  • 76.40
  • 75.71
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.02e3
  • 5.02e3
68.84
  • 68.84
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.35e3
  • 5.35e3
66.79
  • 66.79
AEIR
  • AEIR
UBERON:0002107liver
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
5.94e3
  • 5.94e3
  • 6.82e3
63.10
  • 63.10
  • 57.67
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.46e3
  • 6.46e3
  • 6.72e3
59.89
  • 59.89
  • 58.29
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.60e3
  • 6.60e3
59.03
  • 59.03
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
6.65e3
  • 6.65e3
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0000955brain
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
  • 8.17e3
58.72
  • 58.72
  • 49.29
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
6.65e3
  • 6.65e3
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.71e3
  • 7.71e3
52.15
  • 52.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : ENSGALG00000010482.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSGALG00000010482.

Cross-references

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