G. gallus Gene: SCN3A - ENSGALG00000011040 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000011040
NameSCN3A
Descriptionsodium channel, voltage gated, type III alpha subunit [Source:HGNC Symbol;Acc:HGNC:10590]
OrganismGallus gallus (chicken)
Synonym(s)nav1.3
Orthologs(s)23 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.29e3
  • 3.29e3
  • 3.89e3
79.55
  • 79.55
  • 75.84
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
4.96e3
  • 4.96e3
69.20
  • 69.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSGALG00000011040.

Paralogs (same species)

Cross-references

EnsemblENSGALG00000011040 (SCN3A)
HGNCHGNC:10590 (SCN3A)
EMBLAADN03005271
Uniprot/SPTREMBLF1NMI3, F1NMI3_CHICK

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