G. gallus Gene: T - ENSGALG00000011489 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000011489
NameT
Descriptionbrachyury protein [Source:RefSeq peptide;Acc:NP_990271]
OrganismGallus gallus (chicken)
Synonym(s)ch-t, ch-t|brachyury (t)|brachyury protein|protein t
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.77e3
  • 7.77e3
51.75
  • 51.75
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
9.37e3
  • 9.37e3
41.81
  • 41.81
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
9.44e3
  • 9.44e3
41.36
  • 41.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
9.69e3
  • 9.69e3
39.82
  • 39.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.03e4
  • 1.03e4
  • 1.05e4
35.89
  • 35.89
  • 34.73
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
35.06
  • 35.06
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
30.81
  • 30.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
29.89
  • 29.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
23.42
  • 23.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSGALG00000011489.

Cross-references

EnsemblENSGALG00000011489 (T)
EMBLAADN03003030
Uniprot/SPTREMBLF1NZI2, F1NZI2_CHICK

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