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G. gallus Gene: TOPBP1 - ENSGALG00000011725 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000011725
NameTOPBP1
Descriptiontopoisomerase (DNA) II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
OrganismGallus gallus (chicken)
Synonym(s)kiaa0259, top2bp1
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.90e3
  • 2.90e3
  • 4.45e3
81.99
  • 81.99
  • 72.38
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
3.72e3
  • 3.72e3
76.89
  • 76.89
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
5.21e3
  • 5.21e3
67.69
  • 67.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.74e3
  • 5.74e3
64.38
  • 64.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
7.11e3
  • 7.11e3
55.88
  • 55.88
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.12e3
  • 7.12e3
55.81
  • 55.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.79e3
  • 7.79e3
51.64
  • 51.64
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.10e3
  • 8.10e3
49.71
  • 49.71
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.32e3
  • 8.32e3
  • 9.68e3
48.35
  • 48.35
  • 39.89
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.48e3
  • 8.48e3
47.32
  • 47.32
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.80e3
  • 8.80e3
  • 9.91e3
45.34
  • 45.34
  • 38.48
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.85e3
  • 8.85e3
  • 1.02e4
45.04
  • 45.04
  • 36.49
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
9.23e3
  • 9.23e3
42.69
  • 42.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
9.39e3
  • 9.39e3
  • 1.01e4
41.73
  • 41.73
  • 37.59
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSGALG00000011725.

Cross-references

EnsemblENSGALG00000011725 (TOPBP1)
HGNCHGNC:17008 (TOPBP1)
EMBLAADN03002502
Uniprot/SPTREMBLE1BSJ5, E1BSJ5_CHICK

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