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G. gallus Gene: NUP43 - ENSGALG00000012387 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000012387
NameNUP43
Descriptionnucleoporin 43kDa [Source:HGNC Symbol;Acc:HGNC:21182]
OrganismGallus gallus (chicken)
Synonym(s)ba350j20.1, flj13287
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.28e3
  • 2.28e3
85.85
  • 85.85
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
3.11e3
  • 3.11e3
80.67
  • 80.67
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
3.99e3
  • 3.99e3
  • 4.52e3
75.20
  • 75.20
  • 71.95
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.93e3
  • 5.93e3
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.16e3
  • 6.16e3
61.76
  • 61.76
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.48e3
  • 6.48e3
  • 7.69e3
59.74
  • 59.74
  • 52.24
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.50e3
  • 6.50e3
59.66
  • 59.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.62e3
  • 6.62e3
58.89
  • 58.89
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.74e3
  • 6.74e3
58.17
  • 58.17
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
7.31e3
  • 7.31e3
54.61
  • 54.61
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.45e3
  • 7.45e3
  • 7.75e3
53.73
  • 53.73
  • 51.89
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
7.78e3
  • 7.78e3
51.69
  • 51.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.11e3
  • 8.11e3
  • 8.41e3
49.66
  • 49.66
  • 47.80
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSGALG00000012387.

Cross-references

EnsemblENSGALG00000012387 (NUP43)
HGNCHGNC:21182 (NUP43)
EMBLAADN03003287
Uniprot/SPTREMBLE1C370, E1C370_CHICK

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