G. gallus Gene: TXNDC16 - ENSGALG00000012400 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000012400
NameTXNDC16
Descriptionthioredoxin domain containing 16 [Source:HGNC Symbol;Acc:HGNC:19965]
OrganismGallus gallus (chicken)
Synonym(s)kiaa1344
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
6.55e3
  • 6.55e3
59.35
  • 59.35
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
6.63e3
  • 6.63e3
58.87
  • 58.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
55.02
  • 55.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.27e3
  • 7.27e3
54.88
  • 54.88
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.34e3
  • 7.34e3
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.46e3
  • 7.46e3
  • 9.35e3
53.68
  • 53.68
  • 41.95
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
7.58e3
  • 7.58e3
52.97
  • 52.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.16e3
  • 8.16e3
  • 8.91e3
49.32
  • 49.32
  • 44.69
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.31e3
  • 8.31e3
  • 9.79e3
48.38
  • 48.38
  • 39.22
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.64e3
  • 8.64e3
46.38
  • 46.38
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
9.48e3
  • 9.48e3
  • 1.04e4
41.13
  • 41.13
  • 35.15
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
9.71e3
  • 9.71e3
  • 1.06e4
39.71
  • 39.71
  • 33.95
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
36.12
  • 36.12
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.04e4
  • 1.04e4
35.21
  • 35.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSGALG00000012400.

Cross-references

EnsemblENSGALG00000012400 (TXNDC16)
HGNCHGNC:19965 (TXNDC16)
EMBLAADN03004554
Uniprot/SPTREMBLF1ND60, F1ND60_CHICK

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