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G. gallus Gene: TRIM24 - ENSGALG00000012823 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000012823
NameTRIM24
Descriptiontripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
OrganismGallus gallus (chicken)
Synonym(s)htif1, rnf82, tif1, tif1a
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.32e3
  • 1.32e3
91.81
  • 91.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.99e3
  • 1.99e3
87.64
  • 87.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.78e3
  • 2.78e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
3.62e3
  • 3.62e3
77.52
  • 77.52
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
3.77e3
  • 3.77e3
76.62
  • 76.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.82e3
  • 3.82e3
  • 5.43e3
76.28
  • 76.28
  • 66.27
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.91e3
  • 3.91e3
  • 6.37e3
75.71
  • 75.71
  • 60.46
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
4.12e3
  • 4.12e3
74.45
  • 74.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
4.26e3
  • 4.26e3
73.57
  • 73.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.64e3
  • 5.64e3
64.96
  • 64.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
5.70e3
  • 5.70e3
  • 6.77e3
64.61
  • 64.61
  • 57.94
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.71e3
  • 6.71e3
  • 8.51e3
58.37
  • 58.37
  • 47.14
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.17e3
  • 7.17e3
55.49
  • 55.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSGALG00000012823.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSGALG00000012823.

Cross-references

EnsemblENSGALG00000012823 (TRIM24)
HGNCHGNC:11812 (TRIM24)
EMBLAADN03000619
Uniprot/SPTREMBLF1P4C7, F1P4C7_CHICK

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