G. gallus Gene: CDH6 - ENSGALG00000012917 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000012917
NameCDH6
DescriptionCadherin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q90762]
OrganismGallus gallus (chicken)
Synonym(s)c-cad6b, c-cad6b|cadherin 6b|cadherin-6|cadherin-6b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
  • 7.14e3
58.02464
  • 58.02464
  • 55.55453
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.56e3
  • 8.56e3
46.74541
  • 46.74541
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
9.30e3
  • 9.30e3
  • 1.03e4
42.17315
  • 42.17315
  • 36.21041
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.05e4
  • 1.05e4
34.56001
  • 34.56001
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
31.61165
  • 31.61165
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
27.34244
  • 27.34244
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLD42149
EnsemblENSGALG00000012917 (CDH6)
Uniprot/SWISSPROTCADH6_CHICK, Q90762

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