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G. gallus Gene: CHMP5 - ENSGALG00000013160 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000013160
NameCHMP5
Descriptioncharged multivesicular body protein 5 [Source:RefSeq peptide;Acc:NP_001264328]
OrganismGallus gallus (chicken)
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
719
  • 719
95.54
  • 95.54
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
93.07
  • 93.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.12e3
  • 1.12e3
  • 1.81e3
93.05
  • 93.05
  • 88.77
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
91.38
  • 91.38
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.39e3
  • 1.39e3
  • 1.85e3
91.38
  • 91.38
  • 88.51
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
89.02
  • 89.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
1.81e3
  • 1.81e3
88.78
  • 88.78
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.00e3
  • 2.00e3
  • 2.45e3
87.57
  • 87.57
  • 84.80
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.36e3
  • 2.36e3
  • 3.09e3
85.32
  • 85.32
  • 80.83
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.38e3
  • 2.38e3
85.25
  • 85.25
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
2.60e3
  • 2.60e3
83.86
  • 83.86
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.62e3
  • 2.62e3
83.76
  • 83.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.86e3
  • 2.86e3
  • 3.23e3
82.23
  • 82.23
  • 79.93
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSGALG00000013160.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSGALG00000013160.

Cross-references

EnsemblENSGALG00000013160 (CHMP5)
EMBLAADN03002286
Uniprot/SPTREMBLE1BSI4, E1BSI4_CHICK

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