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G. gallus Gene: VPS45 - ENSGALG00000013899 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000013899
NameVPS45
Descriptionvacuolar protein sorting-associated protein 45 [Source:RefSeq peptide;Acc:NP_001026764]
OrganismGallus gallus (chicken)
Synonym(s)vps45a, vps45a|vacuolar protein sorting 45a|vacuolar protein sorting-associated protein 45
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
2.46e3
  • 2.46e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.69e3
  • 3.69e3
77.08
  • 77.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.75e3
  • 3.75e3
  • 4.88e3
76.70
  • 76.70
  • 69.73
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.82e3
  • 3.82e3
76.30
  • 76.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.19e3
  • 4.19e3
  • 4.89e3
73.99
  • 73.99
  • 69.64
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.50e3
  • 4.50e3
72.09
  • 72.09
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.55e3
  • 4.55e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
  • 4.93e3
69.95
  • 69.95
  • 69.42
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.84e3
  • 4.84e3
  • 5.26e3
69.93
  • 69.93
  • 67.37
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.15e3
  • 5.15e3
68.04
  • 68.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
5.16e3
  • 5.16e3
67.96
  • 67.96
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
63.49
  • 63.49
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
5.91e3
  • 5.91e3
63.32
  • 63.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSGALG00000013899.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSGALG00000013899.

Cross-references

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