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G. gallus Gene: DEPDC1B - ENSGALG00000014729 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000014729
NameDEPDC1B
DescriptionDEP domain-containing protein 1B [Source:RefSeq peptide;Acc:NP_001006576]
OrganismGallus gallus (chicken)
Synonym(s)dep domain-containing protein 1b
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
5.54e3
  • 5.54e3
65.63
  • 65.63
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
5.59e3
  • 5.59e3
65.32
  • 65.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
7.93e3
  • 7.93e3
  • 1.08e4
50.74
  • 50.74
  • 33.07
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
30.44
  • 30.44
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
29.51
  • 29.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSGALG00000014729.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSGALG00000014729.

Cross-references

EnsemblENSGALG00000014729 (DEPDC1B)
EMBLAC187109, AC188450
Uniprot/SPTREMBLF1NB55, F1NB55_CHICK

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