G. gallus Gene: RCL1 - ENSGALG00000015024 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000015024
NameRCL1
DescriptionRNA terminal phosphate cyclase-like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
OrganismGallus gallus (chicken)
Synonym(s)rna cyclase homolog, rnac, rpcl1
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.06e3
  • 2.06e3
  • 2.46e3
87.20
  • 87.20
  • 84.71
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.18e3
  • 3.18e3
  • 4.90e3
80.23
  • 80.23
  • 69.57
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
4.50e3
  • 4.50e3
  • 5.30e3
72.09
  • 72.09
  • 67.12
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.90e3
  • 4.90e3
69.56
  • 69.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
5.36e3
  • 5.36e3
  • 6.03e3
66.71
  • 66.71
  • 62.59
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.28e3
  • 6.28e3
61.02
  • 61.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.21e3
  • 7.21e3
55.26
  • 55.26
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
54.98
  • 54.98
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
7.35e3
  • 7.35e3
54.34
  • 54.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
8.29e3
  • 8.29e3
  • 8.35e3
48.54
  • 48.54
  • 48.17
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
8.64e3
  • 8.64e3
46.34
  • 46.34
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.99e3
  • 8.99e3
44.16
  • 44.16
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.01e3
  • 9.01e3
44.08
  • 44.08
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.02e4
  • 1.02e4
36.36
  • 36.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSGALG00000015024.

Cross-references

EnsemblENSGALG00000015024 (RCL1)
HGNCHGNC:17687 (RCL1)
EMBLAC190246
Uniprot/SPTREMBLE1C1K6, E1C1K6_CHICK

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