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G. gallus Gene: PCMTD1 - ENSGALG00000015250 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000015250
NamePCMTD1
DescriptionProtein-L-isoaspartate O-methyltransferase domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5ZMR3]
OrganismGallus gallus (chicken)
Synonym(s)protein-l-isoaspartate o-methyltransferase domain-containing protein 1
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
649
  • 649
95.98
  • 95.98
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.17e3
  • 1.17e3
92.72
  • 92.72
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.31e3
  • 1.31e3
91.86
  • 91.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
1.33e3
  • 1.33e3
91.75
  • 91.75
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.39e3
  • 1.39e3
91.41
  • 91.41
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
90.65
  • 90.65
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.88e3
  • 1.88e3
88.35
  • 88.35
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.05e3
  • 2.05e3
87.28
  • 87.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.68e3
  • 2.68e3
  • 4.35e3
83.39
  • 83.39
  • 72.99
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.68e3
  • 2.68e3
  • 4.45e3
83.39
  • 83.39
  • 72.38
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
2.86e3
  • 2.86e3
  • 3.27e3
82.25
  • 82.25
  • 79.71
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
3.21e3
  • 3.21e3
  • 5.28e3
80.05
  • 80.05
  • 67.24
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
4.71e3
  • 4.71e3
70.78
  • 70.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSGALG00000015250.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSGALG00000015250.

Cross-references

EnsemblENSGALG00000015250 (PCMTD1)
EMBLAJ719321
Uniprot/SWISSPROTPCMD1_CHICK, Q5ZMR3

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