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G. gallus Gene: SBSPON - ENSGALG00000015634 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000015634
NameSBSPON
Descriptionsomatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
OrganismGallus gallus (chicken)
Synonym(s)c8orf84, rpesp
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
969
  • 969
  • 5.87e3
93.99
  • 93.99
  • 63.58
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
2.23e3
  • 2.23e3
  • 4.34e3
86.18
  • 86.18
  • 73.07
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
4.97e3
  • 4.97e3
69.14
  • 69.14
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
6.31e3
  • 6.31e3
60.80
  • 60.80
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.73e3
  • 7.73e3
51.99
  • 51.99
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.97e3
  • 7.97e3
50.49
  • 50.49
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
8.32e3
  • 8.32e3
48.37
  • 48.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
37.35
  • 37.35
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.14e4
  • 1.14e4
  • 1.14e4
29.33
  • 29.33
  • 29.32
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.16e4
  • 1.16e4
28.23
  • 28.23
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
24.89
  • 24.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSGALG00000015634.

Cross-references

EnsemblENSGALG00000015634 (SBSPON)
HGNCHGNC:30362 (SBSPON)
EMBLAADN03002498
Uniprot/SPTREMBLF1NCI8, F1NCI8_CHICK

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