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G. gallus Gene: SF3B6 - ENSGALG00000016501 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000016501
NameSF3B6
Descriptionsplicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
OrganismGallus gallus (chicken)
Synonym(s)cgi-110, ht006, p14, sap14a, sf3b14a
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
1.05e3
  • 1.05e3
93.52
  • 93.52
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.48e3
  • 1.48e3
90.80
  • 90.80
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
90.56
  • 90.56
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.52e3
  • 1.52e3
  • 1.70e3
90.55
  • 90.55
  • 89.42
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.64e3
  • 1.64e3
  • 1.70e3
89.82
  • 89.82
  • 89.47
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.72e3
  • 1.72e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
  • 1.87e3
88.99
  • 88.99
  • 88.38
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.79e3
  • 1.79e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.88e3
  • 1.88e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
1.94e3
  • 1.94e3
  • 2.11e3
87.97
  • 87.97
  • 86.93
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
1.95e3
  • 1.95e3
87.87
  • 87.87
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.09e3
  • 2.09e3
87.02
  • 87.02
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.27e3
  • 2.27e3
85.90
  • 85.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSGALG00000016501.

Cross-references

EnsemblENSGALG00000016501 (SF3B6)
HGNCHGNC:30096 (SF3B6)
EMBLAADN03003336
Uniprot/SPTREMBLE1BW94, E1BW94_CHICK

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