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G. gallus Gene: PHF13 - ENSGALG00000028148 - Gallus gallus (chicken)

General information

Ensembl IDENSGALG00000028148
NamePHF13
DescriptionPHD finger protein 13 [Source:HGNC Symbol;Acc:HGNC:22983]
OrganismGallus gallus (chicken)
Synonym(s)mgc43399
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0034919juvenile stage
4.13e3
  • 4.13e3
74.35
  • 74.35
AEIR
  • AEIR
UBERON:0000473testis
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
5.67e3
  • 5.67e3
  • 5.69e3
64.82
  • 64.82
  • 64.69
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.95e3
  • 5.95e3
63.08
  • 63.08
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.00e3
  • 6.00e3
  • 6.65e3
62.75
  • 62.75
  • 58.69
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.34e3
  • 6.34e3
60.64
  • 60.64
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
6.39e3
  • 6.39e3
60.35
  • 60.35
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.44e3
  • 6.44e3
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • GgalDv:00000081-year-old chicken stage (chicken)
6.51e3
  • 6.51e3
  • 7.46e3
59.55
  • 59.55
  • 53.66
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
59.41
  • 59.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.59e3
  • 6.59e3
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0002037cerebellum
  • GgalDv:00000081-year-old chicken stage (chicken)
6.66e3
  • 6.66e3
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0002113kidney
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
  • 6.89e3
57.32
  • 57.32
  • 57.25
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.88e3
  • 6.88e3
57.28
  • 57.28
AEIR
  • AEIR
UBERON:0002107liver
  • GgalDv:00000081-year-old chicken stage (chicken)
  • UBERON:0000113post-juvenile adult stage
7.50e3
  • 7.50e3
  • 7.74e3
53.46
  • 53.46
  • 51.93
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSGALG00000028148.

Cross-references

EnsemblENSGALG00000028148 (PHF13)
HGNCHGNC:22983 (PHF13)
EMBLAADN03008037
Uniprot/SPTREMBLR4GGG1, R4GGG1_CHICK

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