G. gorilla Gene: SH3TC1 - ENSGGOG00000005337 - Gorilla gorilla (gorilla)

General information

Ensembl IDENSGGOG00000005337
NameSH3TC1
DescriptionSH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
OrganismGorilla gorilla (gorilla)
Synonym(s)flj20356
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
4.40e3
  • 4.40e3
82.11
  • 82.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
7.45e3
  • 7.45e3
69.69
  • 69.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
9.82e3
  • 9.82e3
60.01
  • 60.01
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
1.50e4
  • 1.50e4
39.01
  • 39.01
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
1.72e4
  • 1.72e4
30.01
  • 30.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0007222late adult stage
1.76e4
  • 1.76e4
28.16
  • 28.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSGGOG00000005337.

Cross-references

EnsemblENSGGOG00000005337 (SH3TC1)
HGNCHGNC:26009 (SH3TC1)
Uniprot/SPTREMBLG3QRH6, G3QRH6_GORGO

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