G. gorilla Gene: COL18A1 - ENSGGOG00000011704 - Gorilla gorilla (gorilla)

General information

Ensembl IDENSGGOG00000011704
NameCOL18A1
Descriptioncollagen, type XVIII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2195]
OrganismGorilla gorilla (gorilla)
Synonym(s)kno, kno1, ks
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0007222late adult stage
741
  • 741
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.28e3
  • 1.28e3
94.81
  • 94.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
3.71e3
  • 3.71e3
84.91
  • 84.91
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
7.19e3
  • 7.19e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0007222late adult stage
7.24e3
  • 7.24e3
70.53
  • 70.53
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
8.22e3
  • 8.22e3
66.52
  • 66.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSGGOG00000011704.

Cross-references

EnsemblENSGGOG00000011704 (COL18A1)
HGNCHGNC:2195 (COL18A1)
Uniprot/SPTREMBLG3R7U1, G3R7U1_GORGO

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