G. gorilla Gene: SPTLC2 - ENSGGOG00000011886 - Gorilla gorilla (gorilla)

General information

Ensembl IDENSGGOG00000011886
NameSPTLC2
Descriptionserine palmitoyltransferase, long chain base subunit 2 [Source:HGNC Symbol;Acc:HGNC:11278]
OrganismGorilla gorilla (gorilla)
Synonym(s)hlcb2a, kiaa0526, lcb2, lcb2a
Orthologs(s)27 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
60.48
  • 60.48
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
9.76e3
  • 9.76e3
60.27
  • 60.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
58.97
  • 58.97
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
57.43
  • 57.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
54.66
  • 54.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
50.72
  • 50.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
43.01
  • 43.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : ENSGGOG00000011886.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSGGOG00000011886.

Cross-references

EnsemblENSGGOG00000011886 (SPTLC2)
HGNCHGNC:11278 (SPTLC2)
Uniprot/SPTREMBLG3R898, G3R898_GORGO, G3S3J1, G3S3J1_GORGO

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