M. mulatta Gene: VAX2 - ENSMMUG00000002087 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000002087
NameVAX2
Descriptionventral anterior homeobox 2 [Source:HGNC Symbol;Acc:HGNC:12661]
OrganismMacaca mulatta (macaque)
Synonym(s)dres93
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.22e3
  • 5.22e3
  • 1.54e4
81.02
  • 81.02
  • 44.02
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
9.89e3
  • 9.89e3
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.24e4
61.59
  • 61.59
  • 54.94
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
1.06e4
  • 1.06e4
  • 1.28e4
  • 1.55e4
61.32
  • 61.32
  • 53.59
  • 43.78
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
60.75
  • 60.75
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
60.39
  • 60.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.35e4
56.64
  • 56.64
  • 50.71
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
1.34e4
  • 1.34e4
  • 1.42e4
  • 1.50e4
51.19
  • 51.19
  • 48.45
  • 45.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
49.65
  • 49.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
48.25
  • 48.25
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
48.01
  • 48.01
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
47.61
  • 47.61
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
  • 1.61e4
45.33
  • 45.33
  • 41.43
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
43.99
  • 43.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
  • 1.68e4
42.21
  • 42.21
  • 38.69
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
39.85
  • 39.85
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
1.73e4
  • 1.73e4
37.03
  • 37.03
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.76e4
  • 1.76e4
35.87
  • 35.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
  • 1.95e4
34.31
  • 34.31
  • 29.13
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.86e4
  • 1.86e4
  • 1.97e4
32.40
  • 32.40
  • 28.37
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000002087.

Cross-references

EnsemblENSMMUG00000002087 (VAX2)
HGNCHGNC:12661 (VAX2)
Uniprot/SPTREMBLF6WPG5, F6WPG5_MACMU

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