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M. mulatta Gene: CHMP6 - ENSMMUG00000003452 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000003452
NameCHMP6
Descriptioncharged multivesicular body protein 6 [Source:HGNC Symbol;Acc:HGNC:25675]
OrganismMacaca mulatta (macaque)
Synonym(s)flj11749, vps20
Orthologs(s)23 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.06e3
  • 2.06e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
2.50e3
  • 2.50e3
90.91
  • 90.91
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
2.52e3
  • 2.52e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.73e3
  • 2.73e3
  • 2.76e3
90.05
  • 90.05
  • 89.96
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
  • 4.97e3
  • 5.03e3
89.82
  • 89.82
  • 81.93
  • 81.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
3.91e3
  • 3.91e3
  • 5.52e3
  • 6.40e3
85.76
  • 85.76
  • 79.91
  • 76.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.14e3
  • 4.14e3
84.94
  • 84.94
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
4.22e3
  • 4.22e3
84.65
  • 84.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.62e3
  • 4.62e3
  • 4.77e3
83.18
  • 83.18
  • 82.64
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
4.68e3
  • 4.68e3
82.99
  • 82.99
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.68e3
  • 4.68e3
  • 5.94e3
  • 6.16e3
82.96
  • 82.96
  • 78.40
  • 77.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.75e3
  • 4.75e3
  • 5.26e3
82.70
  • 82.70
  • 80.88
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
5.19e3
  • 5.19e3
81.11
  • 81.11
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.25e3
  • 5.25e3
  • 5.83e3
80.91
  • 80.91
  • 78.78
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
5.41e3
  • 5.41e3
80.32
  • 80.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
5.42e3
  • 5.42e3
  • 5.46e3
  • 5.82e3
80.27
  • 80.27
  • 80.12
  • 78.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.49e3
  • 5.49e3
80.02
  • 80.02
AEIR
  • AEIR
UBERON:0000473testis
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.78e3
  • 5.78e3
  • 6.12e3
  • 1.12e4
78.97
  • 78.97
  • 77.75
  • 59.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
5.94e3
  • 5.94e3
78.38
  • 78.38
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
7.19e3
  • 7.19e3
73.83
  • 73.83
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.47e3
  • 7.47e3
72.84
  • 72.84
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
70.32
  • 70.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000003452.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSMMUG00000003452.

Cross-references

EnsemblENSMMUG00000003452 (CHMP6)
HGNCHGNC:25675 (CHMP6)
EMBLCM001268
Uniprot/SPTREMBLF7F4P7, F7F4P7_MACMU

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