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M. mulatta Gene: CDH18 - ENSMMUG00000004389 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000004389
NameCDH18
Descriptioncadherin 18, type 2 [Source:HGNC Symbol;Acc:HGNC:1757]
OrganismMacaca mulatta (macaque)
Synonym(s)cdh14, ey-cadherin
Orthologs(s)18 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.27e3
  • 2.27e3
  • 3.80e3
91.74
  • 91.74
  • 86.18
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
3.77e3
  • 3.77e3
  • 4.07e3
  • 6.05e3
86.27
  • 86.27
  • 85.21
  • 77.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
3.95e3
  • 3.95e3
  • 5.12e3
  • 7.23e3
85.62
  • 85.62
  • 81.37
  • 73.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
4.27e3
  • 4.27e3
84.48
  • 84.48
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
5.92e3
  • 5.92e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
6.07e3
  • 6.07e3
77.92
  • 77.92
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.97e3
  • 7.97e3
70.99
  • 70.99
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
8.86e3
  • 8.86e3
67.76
  • 67.76
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
1.09e4
  • 1.09e4
60.33
  • 60.33
AEIR
  • AEIR
UBERON:0000473testis
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.31e4
  • 1.33e4
56.83
  • 56.83
  • 52.33
  • 51.62
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
56.51
  • 56.51
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
49.60
  • 49.60
AEIR
  • AEIR
UBERON:0002107liver
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.69e4
  • 1.73e4
43.49
  • 43.49
  • 38.64
  • 37.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
42.61
  • 42.61
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 2.06e4
39.93
  • 39.93
  • 25.10
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
34.43
  • 34.43
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.83e4
  • 1.83e4
  • 1.86e4
33.39
  • 33.39
  • 32.26
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
2.04e4
  • 2.04e4
25.66
  • 25.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000004389.

Paralogs (same species)

Paralogy information comes from OMA : ENSMMUG00000004389.

Cross-references

EnsemblENSMMUG00000004389 (CDH18)
HGNCHGNC:1757 (CDH18)
EMBLCM001258
Uniprot/SPTREMBLF7FMS7, F7FMS7_MACMU

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