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M. mulatta Gene: TRIM8 - ENSMMUG00000004394 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000004394
NameTRIM8
Descriptiontripartite motif containing 8 [Source:HGNC Symbol;Acc:HGNC:15579]
OrganismMacaca mulatta (macaque)
Synonym(s)gerp, rnf27
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
937
  • 937
  • 3.64e3
96.59
  • 96.59
  • 86.77
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.65e3
  • 1.65e3
  • 3.08e3
94.01
  • 94.01
  • 88.81
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.98e3
  • 1.98e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
2.22e3
  • 2.22e3
91.94
  • 91.94
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0018241prime adult stage
2.45e3
  • 2.45e3
  • 3.40e3
  • 3.80e3
91.08
  • 91.08
  • 87.64
  • 86.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
2.59e3
  • 2.59e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
2.60e3
  • 2.60e3
90.55
  • 90.55
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
90.16
  • 90.16
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.82e3
  • 2.82e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.85e3
  • 2.85e3
89.64
  • 89.64
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
2.87e3
  • 2.87e3
89.56
  • 89.56
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.10e3
  • 3.10e3
  • 3.33e3
88.71
  • 88.71
  • 87.89
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
3.23e3
  • 3.23e3
88.24
  • 88.24
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
3.29e3
  • 3.29e3
88.03
  • 88.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.32e3
  • 3.32e3
  • 3.55e3
87.91
  • 87.91
  • 87.09
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
3.51e3
  • 3.51e3
  • 3.68e3
  • 4.97e3
87.23
  • 87.23
  • 86.63
  • 81.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.68e3
  • 3.68e3
86.60
  • 86.60
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.07e3
  • 4.07e3
  • 4.75e3
85.18
  • 85.18
  • 82.73
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
4.52e3
  • 4.52e3
  • 4.69e3
  • 5.12e3
83.54
  • 83.54
  • 82.96
  • 81.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
4.64e3
  • 4.64e3
83.10
  • 83.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
4.91e3
  • 4.91e3
  • 6.40e3
  • 6.80e3
82.13
  • 82.13
  • 76.70
  • 75.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
6.83e3
  • 6.83e3
  • 1.04e4
  • 1.31e4
75.16
  • 75.16
  • 62.30
  • 52.18
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.50e3
  • 9.50e3
65.44
  • 65.44
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
58.59
  • 58.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000004394.

Cross-references

EnsemblENSMMUG00000004394 (TRIM8)
HGNCHGNC:15579 (TRIM8)
EMBLJU322213, JU471161
Uniprot/SPTREMBLF7FM88, F7FM88_MACMU, F7FM93, F7FM93_MACMU

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