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M. mulatta Gene: XRCC1 - ENSMMUG00000004467 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000004467
NameXRCC1
DescriptionX-ray repair complementing defective repair in Chinese hamster cells 1 [Source:HGNC Symbol;Acc:HGNC:12828]
OrganismMacaca mulatta (macaque)
Synonym(s)rcc
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
2.68e3
  • 2.68e3
  • 3.10e3
  • 3.44e3
90.25
  • 90.25
  • 88.72
  • 87.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
3.11e3
  • 3.11e3
  • 3.95e3
  • 5.61e3
88.69
  • 88.69
  • 85.64
  • 79.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.50e3
  • 4.50e3
  • 5.50e3
  • 6.86e3
83.62
  • 83.62
  • 80.01
  • 75.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
4.60e3
  • 4.60e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
4.67e3
  • 4.67e3
83.03
  • 83.03
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
4.71e3
  • 4.71e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.74e3
  • 4.74e3
  • 6.16e3
82.74
  • 82.74
  • 77.61
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.13e3
  • 5.13e3
  • 5.90e3
81.32
  • 81.32
  • 78.55
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
5.15e3
  • 5.15e3
81.25
  • 81.25
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
5.46e3
  • 5.46e3
80.13
  • 80.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
5.48e3
  • 5.48e3
  • 6.48e3
  • 6.82e3
80.07
  • 80.07
  • 76.41
  • 75.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.61e3
  • 5.61e3
79.59
  • 79.59
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
5.64e3
  • 5.64e3
79.47
  • 79.47
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.17e3
  • 6.17e3
  • 8.23e3
77.54
  • 77.54
  • 70.05
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
6.22e3
  • 6.22e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
6.29e3
  • 6.29e3
77.11
  • 77.11
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
6.36e3
  • 6.36e3
76.86
  • 76.86
AEIR
  • AEIR
UBERON:0002107liver
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.88e3
  • 6.88e3
  • 7.46e3
  • 7.54e3
74.98
  • 74.98
  • 72.87
  • 72.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
6.91e3
  • 6.91e3
74.85
  • 74.85
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
7.27e3
  • 7.27e3
73.55
  • 73.55
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.78e3
  • 7.78e3
71.71
  • 71.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000004467.

Cross-references

EnsemblENSMMUG00000004467 (XRCC1)
HGNCHGNC:12828 (XRCC1)
Uniprot/SPTREMBLF7GL30, F7GL30_MACMU

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