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M. mulatta Gene: SYNPO2 - ENSMMUG00000008702 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000008702
NameSYNPO2
Descriptionsynaptopodin 2 [Source:HGNC Symbol;Acc:HGNC:17732]
OrganismMacaca mulatta (macaque)
Synonym(s)myopodin
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
215
  • 215
  • 1.06e3
99.22
  • 99.22
  • 96.16
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
235
  • 235
99.15
  • 99.15
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
2.14e3
  • 2.14e3
  • 4.74e3
  • 5.07e3
92.20
  • 92.20
  • 82.74
  • 81.55
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
3.20e3
  • 3.20e3
88.34
  • 88.34
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
3.69e3
  • 3.69e3
86.56
  • 86.56
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.81e3
  • 6.81e3
  • 1.12e4
75.22
  • 75.22
  • 59.42
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
  • 9.05e3
73.85
  • 73.85
  • 67.09
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
9.86e3
  • 9.86e3
64.11
  • 64.11
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.36e4
62.45
  • 62.45
  • 50.55
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
1.12e4
  • 1.12e4
  • 1.35e4
  • 1.64e4
59.27
  • 59.27
  • 51.02
  • 40.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
58.01
  • 58.01
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
56.78
  • 56.78
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
1.22e4
  • 1.22e4
  • 1.31e4
  • 1.54e4
55.60
  • 55.60
  • 52.17
  • 43.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
1.25e4
  • 1.25e4
  • 1.32e4
  • 1.36e4
54.38
  • 54.38
  • 51.89
  • 50.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
52.96
  • 52.96
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
52.10
  • 52.10
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
51.19
  • 51.19
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
50.84
  • 50.84
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
1.38e4
  • 1.38e4
49.83
  • 49.83
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
47.27
  • 47.27
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.68e4
  • 1.73e4
44.95
  • 44.95
  • 38.96
  • 37.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.68e4
41.11
  • 41.11
  • 38.85
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
37.11
  • 37.11
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
1.83e4
  • 1.83e4
33.45
  • 33.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000008702.

Cross-references

EnsemblENSMMUG00000008702 (SYNPO2)
HGNCHGNC:17732 (SYNPO2)
Uniprot/SPTREMBLF7E206, F7E206_MACMU, F7H4K3, F7H4K3_MACMU

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