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M. mulatta Gene: TMED1 - ENSMMUG00000012041 - Macaca mulatta (macaque)

General information

Ensembl IDENSMMUG00000012041
NameTMED1
Descriptiontransmembrane p24 trafficking protein 1 [Source:HGNC Symbol;Acc:HGNC:17291]
OrganismMacaca mulatta (macaque)
Synonym(s)il1rl1l, il1rl1lg, mgc1270, p24g1, p24gamma1, st2l
Orthologs(s)31 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.07e3
  • 3.07e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.20e3
  • 3.20e3
  • 5.25e3
88.38
  • 88.38
  • 80.89
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
3.21e3
  • 3.21e3
88.33
  • 88.33
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
3.50e3
  • 3.50e3
  • 5.10e3
  • 5.24e3
87.25
  • 87.25
  • 81.43
  • 80.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.89e3
  • 3.89e3
85.86
  • 85.86
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
4.08e3
  • 4.08e3
85.15
  • 85.15
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
4.83e3
  • 4.83e3
82.44
  • 82.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.01e3
  • 5.01e3
81.79
  • 81.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • MmulDv:00000062-month-old stage (macaque)
5.13e3
  • 5.13e3
  • 5.24e3
  • 6.33e3
81.35
  • 81.35
  • 80.93
  • 76.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.66e3
  • 5.66e3
  • 1.18e4
79.41
  • 79.41
  • 57.11
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.15e3
  • 6.15e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • MmulDv:00000062-month-old stage (macaque)
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
  • 6.64e3
  • 7.81e3
77.40
  • 77.40
  • 75.85
  • 71.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
8.40e3
  • 8.40e3
69.43
  • 69.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.49e3
  • 8.49e3
  • 1.12e4
69.13
  • 69.13
  • 59.41
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.00e3
  • 9.00e3
  • 1.07e4
67.26
  • 67.26
  • 61.18
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0000104life cycle
9.12e3
  • 9.12e3
  • 9.91e3
  • 1.30e4
66.81
  • 66.81
  • 63.94
  • 52.87
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.25e3
  • 9.25e3
66.36
  • 66.36
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
9.33e3
  • 9.33e3
66.07
  • 66.07
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
9.56e3
  • 9.56e3
65.23
  • 65.23
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
9.74e3
  • 9.74e3
64.56
  • 64.56
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • MmulDv:0000046newborn stage (macaque)
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.06e4
  • 1.20e4
63.21
  • 63.21
  • 61.40
  • 56.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
60.59
  • 60.59
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmulDv:00000062-month-old stage (macaque)
1.14e4
  • 1.14e4
58.39
  • 58.39
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.27e4
57.08
  • 57.08
  • 53.87
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
56.45
  • 56.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria24 species31 genesCompare expression

Orthology information comes from OMA : ENSMMUG00000012041.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSMMUG00000012041.

Cross-references

EnsemblENSMMUG00000012041 (TMED1)
HGNCHGNC:17291 (TMED1)
EMBLCM001271
Uniprot/SPTREMBLF7GWE0, F7GWE0_MACMU

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